Spiroplasma sp. NBRC 100390: S100390_v1c07520
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Entry
S100390_v1c07520 CDS
T05859
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sprn
Spiroplasma sp. NBRC 100390
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprn03400
]
S100390_v1c07520 (phrB)
Enzymes [BR:
sprn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
S100390_v1c07520 (phrB)
DNA repair and recombination proteins [BR:
sprn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
S100390_v1c07520 (phrB)
Prokaryotic type
S100390_v1c07520 (phrB)
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APE13558
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All DBs
Position
complement(852997..854292)
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AA seq
431 aa
AA seq
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MNIFIFHRDFRIEDNFGLAQLANEENKIYCLFIFTKEQIKENNYFSQRSFEAMVHCLKQL
NKKVHVNFLKSDSEQQGIKFLLDQGYKINKIYTNRDYTPFAINRSQTMRELSKEHNFIYR
EFDDYLLVEPWTIKTSQNSYYTVFTPFWNKLKLIFSKNPIPTYKVKDFSPQQLKNMDILL
DITNIRSSDFNLPLEFEKIKTAIFRLDHKYQQNRDFVDLENNTAKISTALKFGVISIRQC
YLWSIEKFGTFDNAFARQLAWRDFYYQVTYNAQLHNQWHFSKNWNKKLTINWTNNEEWFQ
KWQNGETGFDFIDAGMKELKETGLLHNRARMVCASFLVKNLQIDWRKGEQYFAQQLIDYD
PIINQCSWQWVAGTGFDAQPFFRIFNPELQQKKYDPKLSYCNKFLKNRPTINKIVNYKTS
TKKALEIYKPK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttatttttcaccgagattttagaattgaagataattttggtcttgctcaa
ttagccaatgaagagaataagatttattgcttatttatttttacaaaagagcaaataaaa
gaaaataattatttttctcaacgtagttttgaagcaatggtccattgtttaaaacagtta
aataaaaaagtccatgttaattttctaaaaagtgatagtgagcaacaaggaattaaattc
ttgttagatcaaggatataaaattaataagatatatactaaccgtgattatactccattt
gccattaatcgcagtcaaacaatgcgtgaattatcgaaagaacataattttatttatcgt
gaatttgatgattatttattggtagaaccatgaacgataaaaactagtcaaaattcatat
tatactgtttttacgccattttgaaataaattaaaactaatttttagtaaaaatcctatt
cctacttataaggttaaagacttttcacctcaacaattaaaaaatatggatattttattg
gatattacaaatattagatctagtgatttcaatttaccattagaatttgaaaaaataaaa
acagcaatttttcgtctagatcataagtatcaacaaaaccgggattttgttgatttagaa
aataatacagcaaaaattagcacagccttaaagtttggtgtgatatcaatccgtcaatgt
tatctttgaagtattgaaaaatttggaacttttgataacgcttttgctcgtcaattagcc
tgacgtgatttttattatcaagtaacttataatgcccaattacataatcaatgacatttt
agtaaaaattgaaataaaaaattaacaattaactgaacaaataatgaagaatgatttcaa
aaatgacaaaatggtgaaacgggctttgattttattgatgctggaatgaaagaattgaaa
gaaacaggtttattacataatcgagcaagaatggtatgcgcatcttttttagttaaaaat
ttacaaatagattgacgaaaaggagaacaatattttgctcaacaattaattgattatgat
ccaattataaatcaatgttcatgacagtgagtagcaggaacgggctttgatgcacaacca
ttttttcggatttttaatcctgaattacaacagaaaaaatatgacccaaaattaagttat
tgtaataaatttttaaaaaatcgcccaacaattaataaaattgttaattacaaaacttca
acaaaaaaggcgttagagatttataaacctaagtaa
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