Spiroplasma sp. NBRC 100390: S100390_v1c09050
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Entry
S100390_v1c09050 CDS
T05859
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sprn
Spiroplasma sp. NBRC 100390
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
S100390_v1c09050 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprn03019
]
S100390_v1c09050 (rnc)
03009 Ribosome biogenesis [BR:
sprn03009
]
S100390_v1c09050 (rnc)
03036 Chromosome and associated proteins [BR:
sprn03036
]
S100390_v1c09050 (rnc)
Enzymes [BR:
sprn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
S100390_v1c09050 (rnc)
Messenger RNA biogenesis [BR:
sprn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
S100390_v1c09050 (rnc)
Ribosome biogenesis [BR:
sprn03009
]
Eukaryotic type
90S particles
RNase
S100390_v1c09050 (rnc)
Prokaryotic type
rRNA processing factors
S100390_v1c09050 (rnc)
Chromosome and associated proteins [BR:
sprn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
S100390_v1c09050 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
DUF2990
Motif
Other DBs
NCBI-ProteinID:
APE13711
LinkDB
All DBs
Position
complement(1028072..1028818)
Genome browser
AA seq
248 aa
AA seq
DB search
MQFINKKPEQLFAELKDFFKQYNIRIKEKKYYLEALTHNSYANENNLNYTYQRMEFLGDA
ILAKEISLYLFLTFPDKNEGEITNLRSKVVREGTLAELVRQMNWAPFLLLGKGEIKTKGY
EKNRILADIYESMLAALYLDLGEETVRAFIDQTLIKMVSNPGFFDQIRDYKTELQEFLQA
GDVRTLEYKLVKESPPLEGNRVLYTVIAEIDGIRYGEGHGYTHKEAEQLAARDALQKLAK
NPKYNFEK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttataaataaaaaacccgagcaattatttgctgaattaaaagatttttttaaa
caatataatattcgaattaaagaaaaaaaatattatttagaagcgttaacacataattct
tatgctaatgaaaataatttaaattatacttatcaacgcatggaatttttgggtgatgct
attttagcaaaagaaatttcattatatctatttttaacttttcctgacaaaaatgaggga
gaaattactaatttacgtagtaaagtagttcgtgaagggacattagcagaattagtccgt
caaatgaactgagctccttttttgttgttagggaaaggagagattaaaacaaaagggtac
gaaaaaaatcgaattttagcagatatttatgaatcaatgttagcagcattgtaccttgat
ttaggagaagaaacagttcgtgcttttattgatcaaactttaattaaaatggtttccaat
ccgggtttttttgatcaaattcgagattataaaactgagttacaagaatttttacaagct
ggtgatgtgcgaacattagaatataagttagtaaaagaatcaccaccattagagggcaat
cgagtattatatactgtgatagcagaaattgatggaattcgttatggggaaggccatggt
tatacgcataaagaagcagaacaattagcagcgcgagacgcgttacaaaaattagcaaaa
aatccaaaatataactttgaaaaataa
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