Spiroplasma sp. NBRC 100390: S100390_v1c10010
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Entry
S100390_v1c10010 CDS
T05859
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sprn
Spiroplasma sp. NBRC 100390
Pathway
sprn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
S100390_v1c10010 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprn03400
]
S100390_v1c10010 (ung)
Enzymes [BR:
sprn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
S100390_v1c10010 (ung)
DNA repair and recombination proteins [BR:
sprn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
S100390_v1c10010 (ung)
Prokaryotic type
S100390_v1c10010 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APE13807
UniProt:
A0A1J0U217
LinkDB
All DBs
Position
complement(1141852..1142514)
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AA seq
220 aa
AA seq
DB search
MWIKYAVGWREFFDNEIKKPYFQQLLKNIDNEYEKNICYPLKTDIFRLFTLIEPKDIKVV
IIGQDPYHGPGQANGLAFSVNSGVKNPPSLVNIFHELKKDLGVDHHASGNLDHWVKEGVF
LYNTIGSVVAKTPLSHKDIGWTTFSQNLIIYLNQMHDDIIYVLWGNYAKQYSEYITNKSN
IIKGSHPSPFSYSLFKDQQFFLKINNLLLKNKKNIIEWKM
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtgaataaagtatgcggttggttggagagagttttttgataatgaaattaaaaaacca
tattttcaacaattgttaaaaaatattgataatgagtatgaaaaaaatatttgttatcct
ttgaaaacagatatttttcggctatttactttaattgaaccaaaagatattaaagttgta
attattggtcaagatccataccatggtccggggcaagctaatggattagcttttagtgtt
aatagtggtgttaaaaatccaccaagtttagttaatatttttcatgaattaaaaaaggat
ttaggagttgaccatcatgctagcggtaatttagatcattgagttaaagagggtgttttt
ttatataatacaattggtagtgttgttgctaaaacaccactaagtcataaggacattggt
tggacaacctttagtcaaaatctaattatttatttaaatcaaatgcatgatgacattatt
tatgttttatgaggtaattatgccaaacaatatagtgaatatattactaacaaaagtaac
attattaaagggtcgcatccatcaccttttagttatagtttgtttaaggatcaacagttt
tttttaaaaattaataatttacttttaaaaaataaaaaaaacataattgaatgaaaaatg
taa
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