Salinivibrio proteolyticus: N7E60_07770
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Entry
N7E60_07770 CDS
T08723
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
spro
Salinivibrio proteolyticus
Pathway
spro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N7E60_07770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spro03019
]
N7E60_07770
Enzymes [BR:
spro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N7E60_07770
Messenger RNA biogenesis [BR:
spro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N7E60_07770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WBA13655
LinkDB
All DBs
Position
complement(1642487..1643878)
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AA seq
463 aa
AA seq
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MSFSSLGLSAPLLKAVQEQGYTTPSPIQEKAIPAVIEGHDVMAAAQTGTGKTAGFTLPIL
ERLQAGKRARPNHVRTLILTPTRELAAQVHKNVEQYSQYTSLSSTVVFGGVKINPQMMKL
RKGADVLVATPGRLLDLYQQNAVRFSQLEVLVLDEADRMLDMGFIRDIRKILGLLPAKRQ
NLLFSATFSDEIRQLAKELVNNPVEISVNPANQTATGVEQCIYPADKKKKAPMLLSLIAD
NNWQQVLVFSKTKHGANRLSRYLEEYGVSAAAIHGNKSQGARTKALEKFKTGEVRVLVAT
DIAARGIDIAHLPQVVNFDLPHVAEDYVHRIGRTGRAGAVGNAVSLVCADEAKDLFAIER
LIKQVLPRHTLADFPVTNPLPESKLDTRPIKPKKPKKNKPRQDGQRSGDNARGHKPVGKN
RRHTDSAGDGKSRGTGNRPPRTRSDSNGAKPRRARPAAAKTSA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctcctctttaggactatctgcaccactattgaaagccgtgcaagagcaaggc
tataccacaccttcaccgattcaggaaaaagcgatccctgcggtgattgaaggccacgat
gtcatggcggcggcgcaaaccggtaccggtaaaaccgcgggctttaccttaccgattttg
gagcgtttgcaggcgggtaaacgtgctcgccctaaccatgtacgtaccttgatcctgacg
ccaacgcgcgagcttgctgcgcaagtgcacaaaaacgtggagcaatacagccaatacacg
tcgctcagctcaaccgtggtatttggtggtgtgaagatcaatccgcagatgatgaaactt
cgtaaaggcgctgatgtgctggtggccactccgggacgcttgctggatctgtaccagcaa
aatgccgtgcgcttttctcagcttgaagtgctggtcttggacgaagccgaccgtatgctc
gatatgggctttattcgtgacattcgtaagatcttgggcttgctgccggctaagcgccag
aatttgctgttctccgccacattctcggatgaaattcgccaactggcgaaagagctagtc
aacaatccggttgagatttcagtcaatcctgcgaaccaaaccgcaaccggggtagagcaa
tgcatttatcccgcggataagaagaaaaaagcgccgatgctgctgtcactgattgccgac
aataattggcagcaggtgttagtgtttagcaaaaccaaacatggcgctaaccgtttgtcg
cgttatctcgaagagtacggtgtcagcgcggcggcaattcatggtaataagagtcaaggc
gcgcgaacgaaagcgttagagaagtttaaaaccggtgaagtacgggtattggttgccacg
gatattgccgcacgagggatcgatattgcccatttaccgcaagtggtaaattttgattta
ccccatgtggcagaagactatgttcaccgtattggtcgtactggtcgtgcaggtgccgtg
ggcaatgcagtgtctttggtttgtgcggacgaagcgaaagatttgttcgccattgaacgc
ttaattaaacaggtattgccgcgtcatactctggcggactttcccgtcacgaatccgttg
ccagagtcgaaattggatacgcgtccaataaagccaaagaaaccgaaaaagaataaaccg
cgtcaagacggacagcgctctggcgataacgcgcgcggacacaaaccggtaggcaaaaac
cgacgtcataccgatagcgcaggcgacggtaagtcacgtggtaccggcaatcgcccacca
cgcacgcgcagcgatagcaacggcgcgaagccacgccgcgcgcgacccgctgcggcaaaa
accagcgcctaa
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