Salinivibrio proteolyticus: N7E60_11860
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Entry
N7E60_11860 CDS
T08723
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K20919
sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
Organism
spro
Salinivibrio proteolyticus
Brite
KEGG Orthology (KO) [BR:
spro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spro03000
]
N7E60_11860
Transcription factors [BR:
spro03000
]
Prokaryotic type
Helix-turn-helix
Other families
N7E60_11860
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Gene cluster
GFIT
Motif
Pfam:
VpsR
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_2
Mg_chelatase
AAA_16
AAA
HTH_7
AAA_5
HTH_29
HTH_22
HTH_17
HTH_50
HTH_23
HTH_IclR
TIP49
HTH_30
TrmB
HTH_1
YdaS_toxin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WBA14389
UniProt:
A0ABY7LAX8
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Position
complement(2527702..2529039)
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AA seq
445 aa
AA seq
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MGLHTGSETNLSSLVVVGGPYEPWIATLEQAGWRCHRCYDLRAAQSLLQDIGPCIGIVDL
SHDDFSLNGVASMVNRNKQVRWLALVREEQLGNEAICQFIVSFCIDYFTSPVPNSQLMST
IGHQLGMLRLERQVWPHLGDHSDMGLEGKSPAMKKLRDQVRRVAPTDVSVLVAGESGTGK
ELVALAIHNASTRAKGPFESIKCSALADEQMQQELLGDDETPGKIRQCHKGTLFFDEIGD
LPLHLQSHLLHLLQEGMLDINHDKYNRDLDVRVIASTHMDLEKRVAEGLFREDLYYRLNV
LRINMPSLKDRQADVTDLADYFLLKFARQYNTQARTFSDEAKSVLSAYSWPGNVRELINQ
VKRAVLLADHLVIEAEHLDLPRQGDYKQSLRKIREESERDALIAVLESNKGQVSAAAREL
GVSRATMYRLLNKHNLIPTPRTFRQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggattacacacagggagtgaaacaaacttgagctcattggtggtcgtcgggggcccg
tatgagccttggatagcaaccctggaacaagcaggctggcggtgtcatcgttgttatgac
ttgcgggcagcacaatctttgctgcaagacattggcccttgtattggtattgttgactta
agccacgatgattttagcctcaatggcgtcgcgtctatggttaaccgtaacaagcaagtg
cgttggttggccttggtgcgtgaagagcaattggggaatgaagcaatctgccagtttatt
gtcagcttttgcattgattacttcacctcgccagtgccgaactcacagttgatgagcacc
attggtcaccaattggggatgctgcgtttggagcgtcaggtgtggccccacttgggcgat
cacagtgatatgggcttggaaggcaaaagccctgcgatgaaaaagctgcgagatcaggtg
cgacgtgttgcgccgaccgatgtgtctgtgctggtggccggtgagagtgggacaggtaaa
gagttggtcgcactggcgattcataacgcctctacccgcgccaaaggcccgtttgagtcg
attaaatgctcggcattggccgacgagcaaatgcagcaagagttattgggtgatgacgag
acgccgggaaaaatacgccaatgccacaaaggcaccttattttttgatgaaatcggtgac
ttaccgctgcacttacaaagccatttgttgcatttattgcaagaggggatgctggatatc
aatcacgacaagtacaatcgtgatctggatgtgcgtgttatcgcctcaacccatatggat
ttagagaagcgggtcgctgaaggattgttccgcgaagatctgtattaccggctgaatgtg
ttgcgtattaacatgccgtcgttgaaagataggcaagccgatgttactgacttagccgac
tattttctgctcaaatttgcccgtcaatataatacccaagcgcgaacgttttcagatgaa
gccaagagtgtattaagcgcctattcatggccggggaacgtgcgggagttaatcaatcaa
gtcaaacgggccgtgcttcttgccgatcacttggtcatcgaagcggaacatctcgattta
cctcgccaaggggactataaacaaagtctgcgcaaaatacgcgaagagtcagagcgcgat
gcattgattgcggtacttgagtcgaacaaaggacaggtgtcggcagcggcgagagagttg
ggcgtgtcgcgagccaccatgtatcgcttgctcaacaaacataacttgatcccgacccct
cgcacgtttcgtcaatag
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