Salinivibrio proteolyticus: N7E60_13545
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Entry
N7E60_13545 CDS
T08723
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spro
Salinivibrio proteolyticus
Pathway
spro03420
Nucleotide excision repair
spro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N7E60_13545 (uvrD)
03430 Mismatch repair
N7E60_13545 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spro03400
]
N7E60_13545 (uvrD)
Enzymes [BR:
spro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N7E60_13545 (uvrD)
DNA repair and recombination proteins [BR:
spro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N7E60_13545 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
N7E60_13545 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
OSTbeta
PhoH
Motif
Other DBs
NCBI-ProteinID:
WBA14677
LinkDB
All DBs
Position
complement(2900634..2902814)
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AA seq
726 aa
AA seq
DB search
MDVSTLLDGLNDKQREAVAAPLGNHLVLAGAGSGKTRVLVHRMAWLMRVEEASPFSVMAV
TFTNKAAAEMRGRIEQLMQGTASGMWCGTFHGICHRILRAHYLDANLPQDFQILDSDDQQ
RLLRRLIKAQNLDEKHWPAKQASWYINGKKDEGLRPKHIDTRHDPVESTWLRIYQAYQEA
CDRAGLVDFAEILLRNLELLRDKAVIRDHYQARFQHILVDEFQDTNNIQYAWLRMMAGQQ
ARVMIVGDDDQSIYGWRGAKVENIQRFLDDFTTPQTIRLEQNYRSTSTILQAANTLIENN
ADRMGKSLWTEGKEGEPISVYAGFNELDEARFVVGKIKTWQDEGGVLSDSAILYRNNAQS
RVLEEALIQAGLPYRIYGGMRFFERQEIKDALAYLRLMANRNDDAAFERVVNTPTRGIGD
RTLETLRGAARDRGQTLWHTAEQILAEKALAGRAANALGRFIELVNALEDDTRDMALYQQ
TDAVIRHSGLRAMYEQEKGEKAQARVDNLEELVTATRQFTPPEEAEAEGMTPLSAFLAHA
ALEAGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRL
CYVGMTRAMEKLYLTYAEMRRVYGKDMFHKISRFIRELPEACLEEVRMRANVSRPAASGG
RFSKTQTQENFNQTGFSLGQRVQHPKFGEGTIINFEGSGGQSRVQVAFNGEGIKWLVTQY
AKLEAL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcaactcttcttgacggactcaacgacaaacagcgtgaagccgtggccgcg
ccgctcggcaaccatttggtgctggcaggtgctggcagtggtaaaacccgggtgctggtt
catcgtatggcttggctaatgcgggtggaagaggcgtcgccgttctcggtgatggcggtt
accttcaccaacaaagcggcagcggaaatgcgcggccgtatcgagcaattgatgcaaggc
accgcctcgggcatgtggtgtggcaccttccacggcatttgccatcgtattctccgtgcc
cactatttggacgccaacctgccacaagacttccaaattcttgattcagacgaccagcag
cgcttgctacgccggttaattaaagcgcaaaacttggatgaaaaacactggcccgccaag
caagcgagttggtacatcaatggcaaaaaagatgaaggcttgcgtcccaagcacattgat
acccgccatgatccggttgaaagcacttggctacggatttatcaggcgtatcaagaagcc
tgtgatcgcgccggtttggtggattttgccgagatcttgctgcgaaacttagagttattg
cgcgataaagcggtgatccgtgatcattaccaagcacgtttccagcacattttggtggat
gagttccaagataccaacaacatccaatatgcgtggctacgcatgatggccggtcaacag
gctagagtgatgattgtcggcgatgacgaccaatccatttacggctggcgtggcgcaaaa
gtcgaaaatattcagcgttttctggacgatttcaccaccccgcagactatccgtttggag
caaaactaccgctcgaccagtacgattttgcaagcggcgaacaccctgattgaaaacaac
gccgaccggatgggcaaaagcctgtggaccgagggcaaagagggcgagcctatttcggtg
tatgccgggtttaatgagctagatgaagcgcgctttgtcgtcgggaaaattaaaacctgg
caagacgaagggggcgtactgagtgacagcgccattttataccgcaacaacgcccaatcc
cgggtgctggaagaagccttaattcaagccggcttgccttatcgtatttacggcggcatg
cgcttttttgagcgtcaggaaatcaaagatgcattggcgtatttacgtttgatggcgaat
cgcaatgacgatgcggcgtttgagcgggtggtaaacacgcccactcgagggattggtgat
cgcactcttgagacgcttcgtggtgcggcgcgcgatcgtggccaaaccttatggcacact
gccgagcaaatcttggccgaaaaagcgctggcagggcgtgcggccaatgcattgggccgg
tttatcgagctggtcaatgcgctagaagatgacacccgtgacatggcactgtatcaacaa
accgatgcggtgatccgtcactccggcttgcgcgccatgtacgagcaagaaaaaggtgaa
aaagcgcaagcacgcgttgataacttggaagagttggtgacggccacgcgccaatttacg
ccacccgaagaggcggaagcggaagggatgacaccgctgtcggcattcttggcccacgcc
gcccttgaggccggtgaagggcaagcggacgagtttgatgacgcggtccaattgatgacc
ttgcacagtgccaaaggtctcgagttccccttagtctttatggtcggggtggaagagggc
atgttccccagccagatgtcagccgaagaagcgggtcgcctagaagaagagcgtcgtctt
tgctatgtcggcatgacgcgagcgatggaaaaactctatctgacctacgcagaaatgcgc
cgtgtgtacggcaaagacatgttccataagatctcgcgctttattcgtgagctgcccgag
gcctgtttggaagaagtgcgcatgcgtgccaatgtctcacgccctgctgcaagcgggggt
cgtttttccaaaacgcagactcaggagaactttaaccaaaccgggtttagtttgggtcag
cgggttcaacaccctaagtttggtgaaggcaccatcatcaactttgaaggcagtggcgga
caaagccgcgtgcaagttgcctttaatggggaagggattaagtggttggtgactcagtac
gccaaactggaagcgctttaa
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