Salinivibrio proteolyticus: N7E60_15280
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Entry
N7E60_15280 CDS
T08723
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
spro
Salinivibrio proteolyticus
Brite
KEGG Orthology (KO) [BR:
spro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spro03016
]
N7E60_15280
Enzymes [BR:
spro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
N7E60_15280
Transfer RNA biogenesis [BR:
spro03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N7E60_15280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF7716
Motif
Other DBs
NCBI-ProteinID:
WBA16735
LinkDB
All DBs
Position
unnamed:complement(287910..289892)
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AA seq
660 aa
AA seq
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MFQDNPLLAQLKQQIQETLPKKEGTVKATEKGFGFLEVDDKTSLFIPPPYMKKVMHGDRV
EAFVRTEKEREVAEPDALVEQSIDRFIGRVQWIRNRLNIVPDHPQIKDAIRAKTQRGLSQ
DELKDGDWVVASLIRHPLKGDDNFFCQVSEKITDANDKIAPWWVTLAKHNLPNQEPAPKE
AWAMLEQGLERRDLTALPFVTIDSESTKDMDDALYVKANEQGGFTMTVAIADPTAYIDAD
DDLDQVARSRGFTIYLPGRNIPMLPRDLSDDLCSLRAHEKRPALCCTFNIAADGTIADDA
EFFSAWIQSHGQLAYDKVSDYIEQGEQAAWQPESSDIADQIHQLHQFALARIEWRETHAV
TFPDRPDYRFELSEDNDVIAIHTDARRIANRIVEEAMISANICAGRKLRESFGFGIFNTH
AGFNSDKLDDVVELVKAHEGEADSESLATVEGFSALRRWLNSLDSTYLDNRLRRFQAYSE
IGHEPAPHYAMGLDVYATWTSPIRKYGDMINHRLLKEIIRGETEANAPADTVGEELAGHR
KHHRMAERDVADWLYVRLLKPEVEAQTRYTAEIFDINRAGMRVRLLENGAPAFIPSSLII
DNKTRIACDKETGTVTIDGNVEFKLGDNLEVVIADIKESTRSIVAKPTQVFALPEQAREE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatcccctgctagcgcaacttaagcaacagatccaagaaaccctgccc
aagaaagagggaacggtgaaagccactgaaaaaggctttggctttttagaagtggacgat
aaaaccagcctctttattccaccaccgtatatgaagaaagtgatgcacggtgatcgtgtt
gaagccttcgttcgcacagaaaaagagcgtgaggtcgcagagccggatgccttggttgag
caaagcattgaccgctttattggtcgcgttcagtggattcgtaatcgtctcaatattgtc
ccggatcatccgcaaatcaaagatgctatccgtgccaaaacccagcgcggcttatcgcaa
gacgaactcaaagatggcgactgggttgtcgcatccctgatccgtcacccactcaaaggc
gacgacaacttcttctgccaagtcagtgaaaaaatcaccgatgccaatgacaagattgcg
ccttggtgggtcacgctagcaaaacataacttaccaaaccaagagcctgcgcctaaagaa
gcatgggcgatgttggagcaaggtttagagcgccgcgatctgaccgcgctccccttcgtg
accattgatagcgaatcgaccaaagatatggacgatgcgttatatgtaaaagccaacgag
caaggcggctttaccatgacagtcgcgattgccgatccgactgcgtatatcgatgcggat
gacgaccttgaccaagtggcccgcagccgcggctttacgatttacttgcccggtcgcaac
atcccaatgttgcctcgcgatctgagtgacgatttgtgttcactacgtgcccacgagaaa
cgtccggcgctttgctgtaccttcaatatcgctgccgatggcaccattgccgatgacgcc
gagtttttctcagcatggatccaatcacacggccagctagcctacgacaaggtgtctgac
tacatcgagcaaggcgaacaagcagcatggcagccagagagcagcgacatcgcggatcaa
atccatcagttgcatcaatttgcacttgctcgcattgaatggcgtgaaacgcatgcggtg
accttccccgatcgtccagactatcgatttgaactcagcgaagataacgatgtgatcgcg
attcacactgacgcgcgccgcatcgctaaccgtatcgttgaagaggcgatgatcagcgct
aacatttgtgcgggtcgcaaactgcgtgaatcgttcggtttcggtatttttaacacccac
gcaggctttaacagtgacaagctggacgatgtagtcgagttggtcaaagcccatgaagga
gaagccgatagcgagagtttggcaaccgttgaaggctttagcgcattgcgtcgttggtta
aacagcctagacagcacgtatctcgacaaccgcctgcgtcgtttccaagcgtacagtgaa
attggtcatgagcctgctcctcactacgcgatgggccttgatgtctacgccacatggaca
tcgcctatccgcaagtacggcgatatgattaaccaccgcttactcaaagagatcattcgc
ggcgaaaccgaagccaatgcccctgcggatacggtcggtgaagaactggctggtcatcgc
aaacaccaccgcatggccgagcgcgatgtcgctgattggctgtacgtccgtttgttgaag
ccagaagtggaagcacaaacccgctacacagcggaaatctttgatattaaccgtgcgggt
atgcgtgttcgcctactcgaaaatggcgcaccggcgtttattccatcgtcgctgatcatc
gataacaaaacccgcattgcctgtgataaagaaacaggcacagtgacgattgatggcaac
gttgagtttaagcttggcgacaatctggaagtggtgattgcggatatcaaagagtctacg
cgctctattgtggcaaaaccaacccaagtgtttgcgctgcctgagcaagcgagagaagaa
taa
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