Salinivibrio proteolyticus: N7E60_15285
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Entry
N7E60_15285 CDS
T08723
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spro
Salinivibrio proteolyticus
Pathway
spro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N7E60_15285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spro03019
]
N7E60_15285
03009 Ribosome biogenesis [BR:
spro03009
]
N7E60_15285
Enzymes [BR:
spro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N7E60_15285
Messenger RNA biogenesis [BR:
spro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N7E60_15285
Ribosome biogenesis [BR:
spro03009
]
Prokaryotic type
rRNA helicases
N7E60_15285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WBA16736
UniProt:
A0ABY7LJV4
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All DBs
Position
unnamed:290264..292069
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AA seq
601 aa
AA seq
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MQESVTKFRQLDLADTLLSALDAMGFESPTPIQAASIPVLLEGRDALGKAQTGTGKTAAF
SLPLLNKVDLSQHKPQAIVMAPTRELAIQVAAEMKTLAQNIKGLKILEIYGGASIVDQMK
ALKSGAHIIVGTPGRVKDLINRDRLKLDEVHTFILDEADEMLKMGFVDDVTWIMEQAPES
AQRVLFSATMPPIVKQIVDRFLRKPARIDVAGSNRTVEKVEQQFWVVKGVEKDEAMSRLL
ETQDTDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSQRERTVDHIKRGVIDILV
ATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRAGKAILLVRTNQMRMLRTI
ERVTQTRMDEIQLPNRDKVAESRVARLASELAEKKDADSIAPFVTLIEQLQNDIEVDATT
LAAMLLQRQQGKRPLFYKGPDPMIAAMERESQRRERRRDDRQNGRDRRDTNPADWDTYQL
SVGREQGVQVKDIVGAIANELGLDKNNIGAIKLAPGHTYVQLPKTMPKEVFAQLQKLRIR
QKETNAQRVEGNVIRDRRPSDRNGGGRGRQDRDNRGRGERRFNRDRGNDRGSFRGERRQA
Q
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatctgtaaccaaatttcgccagttagatctggccgacacccttttatctgca
cttgacgccatgggctttgaatcgccaacaccgattcaggctgcgtctattcctgtgctg
ctagaaggccgtgatgcgctaggtaaagcgcagacggggacgggcaaaaccgcggcgttt
tctttgccgctgttgaacaaagttgatttaagccagcataaacctcaagccatcgtgatg
gcgccgactcgcgagttggccattcaggttgctgctgagatgaagaccttggcgcaaaac
atcaaaggcctcaaaattcttgagatctacggcggtgcttcgatcgttgatcaaatgaag
gcgctgaaaagcggcgcgcacattatcgtgggtacccctggtcgtgtgaaagatttgatt
aaccgcgatcgtttgaagctggatgaagtacatacctttattctcgacgaagctgacgaa
atgctcaaaatgggcttcgtagacgacgtcacttggatcatggagcaagcgcctgagtca
gcacaacgcgtgttgttctctgccaccatgcctccaatcgttaaacaaatcgttgatcgt
ttcttgcgtaagcctgctcgcatcgacgttgcgggaagcaaccgtacggttgagaaagtt
gagcaacaattctgggtcgtgaaaggcgtagaaaaagacgaagcgatgagccgtcttttg
gaaacgcaagacacagacgcctcgattgtgttcgttcgcactcgtcaagataccgagcgt
cttgcggactggttgtctgcacgtggctttaaagccgctgcgctgcacggtgatattcca
caatctcaacgtgagcgtacggttgaccacatcaaacgtggtgtgattgatattttggta
gcaactgacgttgttgcgcgtggtcttgatgtgccacgtatcacccatgtctttaactat
gacattccgtttgatgttgaatcttacattcaccgcattggtcgtaccggtcgtgctgga
cgtgcaggtaaagcgatcttgttggtacgtaccaaccagatgcgtatgctgcgtaccatt
gagcgtgtcactcagacgcgcatggacgaaatccagttgccgaaccgcgataaagtagcg
gaatctcgtgttgcccgtttggctagcgaactggctgagaaaaaagatgctgactcaatc
gctcctttcgtcaccttgattgaacagctccaaaacgacatcgaagttgatgcgactacc
ttagcggcgatgctacttcagcgtcagcaaggcaagcgtccattgttctacaaaggccct
gatcctatgattgcggcgatggaacgtgaaagccaacgtcgtgagcgtcgtcgtgatgat
cgccaaaatggtcgtgaccgccgtgatactaacccggcagattgggatacctatcagtta
agcgtgggtcgtgagcaaggcgtacaagttaaagacatcgtgggcgcgattgctaacgag
ctaggtctagacaaaaacaacattggtgcgatcaaactggcaccgggacacacttacgta
cagttgccaaagaccatgccaaaagaagtctttgcgcagcttcagaagctacgtattcgc
cagaaagaaaccaacgcacaacgcgttgaaggcaatgtgatccgtgaccgtcgtccaagc
gatcgcaatggtggtggccgtggtcgtcaagaccgtgacaaccgtggtcgtggcgaacgt
cgcttcaaccgtgaccgtggcaatgatcgcggctcattccgcggtgagcgtcgccaagcg
cagtaa
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