Sphingomonas sp. R1: OIM94_00770
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Entry
OIM94_00770 CDS
T11062
Name
(GenBank) SDR family NAD(P)-dependent oxidoreductase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00523
Polyketide sugar unit biosynthesis
sprr01110
Biosynthesis of secondary metabolites
sprr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OIM94_00770
Enzymes [BR:
sprr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
OIM94_00770
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NmrA
Polysacc_synt_2
NAD_binding_10
adh_short
KR
NAD_binding_4
RmlD_sub_bind
Sacchrp_dh_NADP
3HCDH_N
DUF6891
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
UYY77575
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Position
complement(141515..142636)
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AA seq
373 aa
AA seq
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MNMAEKVLVTGGAGFIGCQVSAELLRRGHQVRVLDSMLEQVHGTRDRPEALEAEVELVRA
DVRDGEAVARALQGVDSVIHLAAEVGVGQSMYEVERYTSANDVGTAVLFERLIDHPVRRV
VTASSMSIYGEGLYRDADGALVENAERGIVRDGQQQWNPLDAHGRPLEPVATPEWKRPSL
ASIYALNKYVQERTTHIMGAPYGIETTCLRLFNVYGPGQALSNPYTGVLAIFASRLLNGE
RPMIFEDGAQRRDFVHVSDVARAFAEALTLPQAAGETFNIGSGDDRSVTQVAEALARAMG
RNDATPEIVGKARVGDIRHCFCDTSLARERLGFEARQDFETGLAELAEWVQQQTAEDRVA
QARAELEKRGLVA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggcggaaaaggtgctcgtaacgggcggcgcaggatttatcggttgccaggtc
tccgccgagcttctgcgcagggggcatcaggtccgcgtgctcgattcgatgctggaacag
gtccacggcacgcgggatcgtccggaagcgctggaggccgaggtcgagcttgtccgcgcc
gatgtccgcgatggcgaagcggtggcccgcgcgctgcagggcgtcgacagcgtcatccac
ctcgccgccgaagtcggcgtcgggcagtcgatgtatgaggtcgagcgctatacctccgcc
aatgacgtcggcacggcggtgctgttcgaacgactgatcgaccatcctgtccgccgcgtc
gtcaccgcctcgtcgatgagcatctatggcgagggcctgtaccgcgacgccgatggagcg
ctggtggaaaatgccgaacgcggcatcgttcgcgatgggcagcaacagtggaatccgctc
gatgcgcacggccgcccgctggagcccgtggccacgcccgagtggaagcggccgagcctg
gcttccatctacgcgctcaacaaatatgtgcaggagcgcaccacccacatcatgggcgcg
ccctatggcatcgagacgacgtgcctgcggctgttcaacgtctacggtccaggccaggct
ctctccaatccgtataccggcgtgctggcgatcttcgcctcgcgactgctcaacggcgaa
cgcccgatgatcttcgaggatggcgcgcagcgtcgggatttcgtccatgtgagcgacgtc
gcccgcgccttcgccgaagcgctcacgctgccgcaggcggccggcgagacgttcaacatc
gggtcgggcgacgatcgttcggtgacgcaggtggccgaggcgctcgcccgcgcgatgggc
cggaacgatgccacgccggagatcgtcggcaaggcccgtgtcggcgacatccgtcactgt
ttctgcgacaccagtctcgcccgcgagcggctcggtttcgaggcacgacaggatttcgag
accggcctcgccgaactcgccgagtgggtgcagcagcagaccgccgaggaccgcgttgcc
caggcgcgcgccgaactggagaagcggggcctcgtcgcatga
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