Sphingomonas sp. R1: OIM94_01085
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Entry
OIM94_01085 CDS
T11062
Name
(GenBank) DUF4982 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00052
Galactose metabolism
sprr00511
Other glycan degradation
sprr00600
Sphingolipid metabolism
sprr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
OIM94_01085
09103 Lipid metabolism
00600 Sphingolipid metabolism
OIM94_01085
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
OIM94_01085
Enzymes [BR:
sprr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
OIM94_01085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro2_C5
DUF4982
Glyco_hydro_2
Glyco_hydro_2_N2
Glyco_hydro_2_N
BetaGal_ABD2
TAT_signal
Invasin_D3
Motif
Other DBs
NCBI-ProteinID:
UYY77634
LinkDB
All DBs
Position
233074..235959
Genome browser
AA seq
961 aa
AA seq
DB search
MDRRQLLLGSAGLGALASLGLPEAKAAGRAVEGDGFPMPQPKTGLMPRLPDGDPTRTRIE
RGWRFHEGDVQPEALKNHDDTYGSVKAGNARGAAARDYDDSDWAEVRLPHDWASFQPFEK
TANVSQGYRKRGIGWYRRRLTLDAADHGKTIELHLDGVATNATVWVNGSVVAHSWSGYAS
IIVDMTPFARFGEEDNVIAIRVDAEAMEGWWYEGAGLYRHAWLVRRSPVSIVTDGVHCDP
RRTDNGWQVPVTVTVGNIEPAPVGVVIEADLLDPAGKRVASGTTATTAMVLDRVEASLTL
AVGAPQLWSVETPTLYIVHTRLLRDGKLIDERRTAIGFRTVRFDADNGLFVNDKPVKLKG
VCIHQDHAGVGVAQYDALLGWRLERLKAMGCNAIRMSHNAPTAELLDWCDRMGFLVMDEN
RHFNPAPDYLAQLAWMVRRDRNHPSVILWSVFNEEPMQGTEAGVEMVRRMEAAVRKLDDS
RPVTSAMNGSFYNPQNVSSVVDVMGFNYYQGEYDKWHRLNPGRPSTSSEDTSAFETRGAF
ASNPAAHVITSYDDEAASWGNTHRKAWQLIAAKPFIAGGFVWTGFDYHGEPTPYEWPTIA
SFFGIMDLCGFPKTAFGIHSAAWIDDAPVVWLAPHWTWPGREGQTIKVFVASNAESVTLL
LNGKVIGSQKVDRLQGNEWQVPYAPGRLEAQAMRGGKIVARMVHETAGKPVALRLTPART
VMAGDDEDVQPITIDAVDAKGRHVPTANLMTNFTVEGASILGIGNGDPNSHEPEKGNARS
LFNGLAQLILQAGSGRGTITVRATAEGLQPARLTIDRAEIAPRAQVGVTPPLMVLGDWRR
SALLADRPGPGLVPDNNSWAFLRSAMPTPAEPQPGWRVYTHRLSPWKRIAAEGGTLRFAS
VGGRATLWMDGKKLAEKTDPAPASLEAVIPAGAGQRLVELIVEAPAGQISGLLGKVTLTP
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcgccagttgctgctcggcagcgcggggttgggggcgcttgcctcgctcggg
ctgcccgaagcgaaggcggccggccgcgccgtggaaggcgacggcttcccgatgccccag
cccaagaccgggctgatgccgcgcctgccggacggcgatcccacgcgtacccgcatcgaa
cgcggctggcgcttccatgagggcgatgtgcagcccgaggcgctcaagaaccacgacgat
acctatggcagcgtgaaggccggcaacgcccgcggcgccgccgcccgcgactatgacgac
agcgactgggccgaggtgcgcctgccgcacgactgggcatcgttccagcctttcgagaag
accgccaacgtctcgcagggctatcgcaagcgcggcatcggttggtaccgccgccggctc
acgctcgatgcggccgatcacggcaagacgatcgagctgcatctcgacggcgtcgcgacg
aatgcaacggtgtgggtgaacggcagcgtcgtcgcgcacagctggtcgggttacgcgagc
atcatcgtcgacatgacgcccttcgcgcgcttcggcgaagaggacaatgtgatcgccatc
cgcgtcgatgccgaggcgatggaaggctggtggtacgagggcgcgggcctctatcgccac
gcctggctggtgcgccgatcgccggtttcgatcgtcaccgatggggtgcattgcgatccg
cgcaggaccgacaatggctggcaggtgccggtcaccgtcacggtcggcaatatcgaacct
gcgccggtcggcgtggtgatcgaggcggatctgctcgatccggcaggcaagcgcgtggcg
agcgggacgaccgccaccaccgcaatggtactagaccgcgtcgaggcgtcgctgaccctc
gcagtcggcgcgccgcagctctggtcggtcgagactccgacgctctacatcgtgcacacc
cggctgctgcgtgacggcaagctgatcgacgagcgccgcaccgcgatcggctttcgcacg
gtccgcttcgatgccgacaacggcctgttcgtcaacgacaagccggtcaagctgaagggc
gtgtgcatccatcaggaccatgccggtgtgggcgtcgcccaatatgacgcgctgctcggc
tggcggctcgagcggctgaaggcgatgggctgcaacgcgatccgcatgtcgcacaatgcc
cctaccgccgaactgctcgactggtgcgaccggatgggcttcctcgtcatggacgagaac
cgccatttcaaccccgcgccggattatctggcgcagctggcgtggatggtgcgccgcgat
cgcaaccaccccagcgtgatcttgtggtcggtgttcaacgaagagccgatgcagggcacc
gaggccggggtggaaatggtccgccgcatggaagccgcggtgcgcaagctggacgacagc
cgcccggtcacctcggcgatgaacgggtctttctacaatccgcagaacgtctcctcggtc
gtcgacgtcatggggttcaactattaccagggcgagtatgacaagtggcaccggctgaac
cccggccgacccagcaccagctcggaggataccagcgcgttcgaaacgcgcggcgccttt
gccagcaatcctgccgcccatgtgatcacctcgtatgacgacgaggcggcaagctggggt
aacacgcaccgcaaggcatggcagctgatcgcggccaaacccttcatcgccggcgggttc
gtgtggacgggtttcgactatcatggcgagccgaccccctatgaatggccgaccattgcc
agcttcttcggcatcatggacctgtgcggcttccccaagaccgcgttcggcatccacagc
gcggcctggatcgacgacgcgccggtggtgtggctcgcgccgcactggacctggccgggg
agggaaggccagaccatcaaggtgttcgtcgcctccaatgccgagagcgtgacgctgctc
ctgaacggcaaggtgatcggctcgcagaaggtagaccggttgcagggcaatgaatggcag
gtgccgtacgcgcctggcaggctggaggcgcaggcgatgcgcggcggcaagatcgtcgcg
cggatggtgcacgaaaccgccggcaagccggtggcgctgcggcttaccccagcgcgcacc
gtcatggcgggcgacgacgaggatgtgcagccgatcaccatcgacgcagtggacgccaag
ggtcggcacgtgccgaccgccaatctcatgaccaacttcacggtcgagggggcgagcatc
ctcggtatcggcaatggcgatcccaacagccatgagccggagaagggcaatgcacgctcg
ctgttcaacggcctcgcgcagctgatcctccaggccggtagcgggcgcggcacgatcacg
gtgcgcgcgaccgcggaggggctgcagcccgcgcggctgaccatcgaccgcgccgagatc
gcgccgcgtgcgcaggtgggcgtcaccccgccgctgatggtgcttggcgactggcgccgc
tcggcgctgctggccgacaggccggggccgggcctggtgccggacaacaacagctgggcg
tttctgcgcagcgcgatgccgacgccggccgagccgcagccgggttggcgcgtctacacc
caccgcctcagcccctggaagcgcatcgcggccgagggcggtacgctgcgcttcgccagt
gtcggcgggcgtgcgacattgtggatggacggcaaaaagctcgccgagaagaccgatccc
gcaccggcgtcgctggaggccgtgatcccggcgggcgccggacagcgcctggtggaactg
atcgtcgaggcgccggccggccagatctccggcctgctcggcaaggtgacgctgaccccc
cgatga
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