Sphingomonas sp. R1: OIM94_01330
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Entry
OIM94_01330 CDS
T11062
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sprr03000
]
OIM94_01330
Transcription factors [BR:
sprr03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
OIM94_01330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
HTH_24
HTH_8
NirdL-like_HTH
Xre-like-HTH
RP-C
HTH_20
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
UYY77680
LinkDB
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Position
281399..282127
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AA seq
242 aa
AA seq
DB search
MDRNQAAMGAVEWTLPARCAACGVRMASLCGGMSARALEALNRVGRKRVLRRGEVLIWQG
DIAEQVGILHHGLVKLSASLEDGREQMLGLAFPADFVGAIGDRPSSHCVTALTETELCVF
PRSALPALVEAHPEIGQALLSRAYDELDQLRRWMLLLGRKSAEERVASLLLQFAARGSCR
SGAPVVLPLTRQQMAELLGLTIETVSRKLTAMKRDGVIALPDLRSFVILDRDALATIAAE
TP
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaccaagcggcgatgggcgcggtggaatggacgttgccggcgcggtgcgcg
gcctgcggcgtgcggatggcgtcgctgtgcggcggcatgtcggcaagggcgctggaggcg
ctcaaccgggtcggccgcaagcgggtgctgcgccggggagaggtgctgatctggcagggc
gacatcgccgagcaggtcggcatcctgcatcacgggctggtcaagctttccgcctcgctc
gaggatggtcgggaacagatgctgggtctggccttcccggccgatttcgtcggcgcgatc
ggcgatcggccgtcgagccactgcgtcaccgcgctgaccgaaacggaattatgcgtgttt
ccgcgcagcgcgctgcccgcgctggtggaggcgcatccggagatcggccaggcgctgctc
agccgtgcctatgacgaactggaccagctgcgccgctggatgctgttgctcgggcgcaaa
tcggccgaggaacgtgtcgcgagcctgttgctgcaattcgccgcgcggggcagctgtcgg
tccggtgcgcccgtggtgttgccgctcacccgccagcagatggcggagctgctgggcctg
acgatcgagaccgtgagccgcaagctgaccgcgatgaagcgggacggtgtgatcgccttg
cccgatttgcgcagcttcgtgatcctcgatcgcgatgcgctggcgacaatcgcggcggag
actccgtaa
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integrated database retrieval system
