Sphingomonas sp. R1: OIM94_01485
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Entry
OIM94_01485 CDS
T11062
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00970
Aminoacyl-tRNA biosynthesis
sprr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OIM94_01485 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sprr03029
]
OIM94_01485 (gatB)
Enzymes [BR:
sprr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
OIM94_01485 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
OIM94_01485 (gatB)
Mitochondrial biogenesis [BR:
sprr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
OIM94_01485 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF7384
Motif
Other DBs
NCBI-ProteinID:
UYY77711
LinkDB
All DBs
Position
311932..313443
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AA seq
503 aa
AA seq
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MATKTASSYRIQGDTGEWEVVIGLEVHAQITSQAKLFSGAATAFGAEPNSQVSLVDAAMP
GMLPVLNGECIRQAVRSGMAIGAVINKWSRFDRKNYFYADNPQGYQISQLFHPLVGEGQI
TISLDEKDPEAEVKAIGVERIHVEQDAGKLIHDQHPTRSYVDLNRAGVALMEIVSKPDMT
SPAEAGAYLSKLRSILRYVGSCDGNMDQGSMRADVNVSVRKPGDPLGTRTETKNVNSVRF
VMQAIEYEARRQVEVLESGGRVVQETRLFDPDKGETRSMRSKEDAQDYRYFPDPDLLPLE
LDDAFLEECRASLPELPDAKRRRYEESLGLTAYNAAVLTAEAETARWFEALLAESARIQK
KGEQEVARAAANWLLSDLYGALNRLGKGIDESPVSPEQGAELLALIADGTISNTLGKQVF
EIMLESGDAPGKIVEERGMKQTSDTGAIEAVIAEILAKNPNQLEQYRAGKEALFGFFVGQ
TMKAMAGKANPAVVNELLKKALS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaagactgcatcgagctaccgaatccagggcgacaccggcgaatgggaggtc
gtgatcggcctcgaggtccatgcgcagatcacgtcgcaggccaagctgttctccggcgcg
gcaacggcattcggggccgagccgaacagccaggtcagcctagtcgacgccgccatgccc
ggcatgctgccggtgctcaatggcgagtgcatccggcaggcggtgcgcagcggcatggcg
atcggcgcggtgatcaacaaatggtcgcgtttcgatcgcaagaactatttctacgccgac
aacccccagggctatcagatcagccagctgttccatccgctggtgggcgaggggcagatc
acgatcagcctggacgagaaggatcccgaggccgaggtgaaggcgatcggcgtcgagcgc
atccatgtcgagcaggatgccggcaagctgatccacgaccagcacccgacgcgctcctat
gtcgacctgaaccgcgccggcgtggcgctgatggagatcgtgtcgaagcctgacatgacc
tcgccggcggaggcaggcgcgtacctttcgaagctgcgctcgatcctgcgctacgtcggc
agctgcgacggcaatatggaccagggctcgatgcgcgccgacgtgaacgttagcgtccgc
aagcccggcgatccgctgggcacgcgcaccgagaccaagaacgtcaactcggtccgcttc
gtcatgcaggcgatcgaatatgaggcgcgtcgccaggtcgaggtgctggagagcggcggt
cgcgtcgtccaggagacccgcctgttcgatccggacaagggcgagacccgctcgatgcgc
tcgaaggaagacgcgcaggattatcgctatttccccgaccccgacctgctgccgctcgag
ctggacgacgcattcctcgaggaatgtcgcgccagcctgcccgaactgcccgacgccaag
cgccgccgctacgaggagtcgctgggcctcaccgcctacaacgccgcggtgctgaccgcc
gaggcggagaccgcgcgctggttcgaggcgctgctcgccgaaagcgcgcggatccagaag
aagggcgaacaggaagtcgcccgcgccgcggccaactggctgctctcggacctgtacggc
gcgctcaaccgcctcgggaagggcatcgacgagagcccggtgagccccgaacagggtgct
gaactgctcgcgctgatcgccgacgggacgatctccaacacgctgggtaagcaggtgttc
gagatcatgctcgagagcggcgatgcgcccggcaagatcgtcgaagagcggggcatgaag
cagaccagcgacaccggcgcgattgaggcggtgatcgccgagatcttggccaagaacccc
aaccagctggagcagtatcgcgccggcaaggaggcgctgttcggcttcttcgtcggccag
acgatgaaggcgatggccggcaaggccaatcccgcggtggtcaacgagctgctgaagaag
gcgctgagctga
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