Sphingomonas sp. R1: OIM94_01595
Help
Entry
OIM94_01595 CDS
T11062
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr02024
Quorum sensing
sprr03060
Protein export
sprr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OIM94_01595 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OIM94_01595 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OIM94_01595 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sprr02044
]
OIM94_01595 (ffh)
Enzymes [BR:
sprr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OIM94_01595 (ffh)
Secretion system [BR:
sprr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OIM94_01595 (ffh)
Eukaryotic Sec-SRP protein
OIM94_01595 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_30
AAA_22
AAA_31
AAA_16
ABC_tran
AAA_19
VirC1
APS_kinase
AAA_33
AAA_17
ParA
Thymidylate_kin
MobB
YqeC
AAA_5
ArsA_ATPase
ATP_bind_1
KTI12
AAA_18
6PF2K
Fer4_NifH
cobW
DO-GTPase1
MMR_HSR1
AAA_14
AAA_24
KAP_NTPase
nSTAND3
NPHP3_N
AAA_28
ResIII
TsaE
AAA_7
AAA
NTPase_1
Mur_ligase_M
NACHT
Motif
Other DBs
NCBI-ProteinID:
UYY77730
LinkDB
All DBs
Position
339287..340768
Genome browser
AA seq
493 aa
AA seq
DB search
MFESLSDRLGGVFERLRGRGALAEADVRTAMREVRVALLEADVALPVAREFVDKVTEQAV
GQQVLRSVTPGQQVVKIVHDALVDMLGADTAELAIDVTPPAVIMLVGLQGSGKTTTTAKL
AKLLKKQGKKVMMASLDVNRPAAQEQLAVLGTQTEVATLPIVTGQQPVDIARRALQSAKL
QGFDVVMLDTAGRLHVDQALMDEMKAVADISKPQEILLVVDSLTGQDAVNVASNFSAQVP
LTGVILTRMDGDARGGAALSMRAVTGQPIKFAGMGEKLDQIEPFHPKRVAGRILGMGDVV
SLVERAAASIEQEDAERMANRLAKGQFDMNDLRAQLAQMRKMGGISALAGMIPGMKKAQA
AVDQVGGDKVLLRMDAIIGSMTPKERAKPELLNAKRKIRIAKGSGLTVQDVNKLIKMHQE
MQTAMKRLKKMGGLKGMLGMLAKGGPGGGMGGIGNALGGAEMGEMMDKVGAGLPGLPGGA
KLPPGFENLLKKK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagagtttgagcgatcggctgggcggcgtcttcgagcgcctgcgcggacgtggc
gcgctcgccgaggccgatgtccggaccgcgatgcgcgaagtacgcgtggcgctcttggaa
gcggacgtcgcgctgcccgtcgcccgcgagttcgtcgacaaggtaaccgagcaggccgtc
ggccagcaggtgctgcgctcggtcacgccgggccagcaggtcgtcaagatcgtccatgac
gcgctggtcgacatgctcggcgccgataccgccgagctcgcgatcgacgtcaccccgccg
gcggtgatcatgctcgtcggcctgcagggctcgggcaagaccacgaccaccgccaagctt
gccaagctgctgaagaagcagggcaagaaggtgatgatggcgtcgctggacgtgaaccgt
ccggccgcgcaggaacagctcgcggttctcggcacccagaccgaagtggcgacgctgccg
atcgtcaccggccagcagccggtcgacatcgcgcggcgtgcgctgcagtcggcgaagctt
cagggcttcgacgtggtgatgctcgacaccgccggccgcctccacgtcgaccaggcgctg
atggacgagatgaaggcggtcgccgacatctcgaagccgcaggaaatcctgctcgtcgtc
gactcgctcaccggccaggacgcggtgaacgtcgccagcaacttctcggcgcaggtgccg
ctgaccggcgtgatcctcacccggatggacggcgatgcgcgcggcggtgcggcgctgtcg
atgcgcgcggtcaccggccagccgatcaagttcgccggcatgggcgagaagctcgaccag
atcgagccgttccatccgaagcgcgtcgccggccgcatcctcggcatgggcgacgtggtc
agcctggtcgagcgcgctgcggcgtcgatcgagcaggaagacgccgagcgcatggcgaac
cggctcgccaagggccagttcgacatgaacgacctgcgcgcgcagctggcgcagatgcgc
aagatgggcggcatcagcgcgctggcggggatgatccccggcatgaagaaggcgcaggcc
gcggtcgaccaggtcggcggcgacaaggtgctgttgcgcatggacgcgatcatcggttcg
atgacgcccaaggagcgcgccaagcccgaactgctcaacgccaagcgcaagatccgcatc
gccaagggcagcggcctgaccgtgcaggacgtcaacaagctcatcaagatgcatcaggag
atgcagaccgcgatgaagcgcctgaagaagatgggcggtctgaagggcatgctcggcatg
ctcgccaagggcggcccgggcggcggcatgggcggcatcggcaatgccctgggcggcgcc
gagatgggcgagatgatggacaaggtgggcgccggcctgccgggtctgccggggggcgcc
aagctgccgccgggcttcgagaatttgctgaagaagaagtaa
DBGET
integrated database retrieval system
