Sphingomonas sp. R1: OIM94_01880
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Entry
OIM94_01880 CDS
T11062
Name
(GenBank) phage/plasmid primase, P4 family
KO
K06919
putative DNA primase/helicase
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
OIM94_01880
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Gene cluster
GFIT
Motif
Pfam:
D5_N
DUF5906
VapE-like_dom
SCNM1_acidic
ParA
Motif
Other DBs
NCBI-ProteinID:
UYY77780
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Position
384839..386389
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AA seq
516 aa
AA seq
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MADKTGFEVAVVDPWALAWKELNDQGNADRLVAHAQGLLTFVRSWGWLAYEDGHWSRDDG
ERLARLKAMDVARGMRAEMEALQDRLDRRDLPAGMTEELLESRIEALSKHATKSGDSSRT
KAMLEQAANLDVLNRREEEFDADPLTLNVRNRTLRFVQGADGWELRDAPHDPEDLLTRQC
AADWVPEVENAMWVKHMETVLPNPDVRWFFQKLMGYCATGLNVEQIFVILQGKGGDGKST
AMNALRIVLGSYAVSGKVQTFLDGPDTDAGGATPELVRFVGDTRLISIQEPKRGKAMAEE
RVKQFTGGSPVPYRPLYGAESEFEPRGKVVMEANKRPRITGDDDGIWRRIIIMMWRHQFK
GQAIVKGMHNRILREDNGGPSGVLNWIIRGIIGYLNEGLEQPQEVVDAIEEYRRSANPFS
EWVQAMLDMSDPMARELSADLYGSYKQWCEAESKADNEIMNSTRFGRELGDLQIIMCGKD
SKGRKLRRGARLRKSDELLPPAAEPQEAPDDDVPPL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagacggggtttgaagtggcggtggtggatccgtgggcgctggcgtggaag
gaactgaacgaccagggcaacgccgatcggcttgtcgcacatgcgcaggggctgctgacc
tttgttcgcagctggggctggctggcctatgaggatggccattggtctcgcgacgatggc
gagcggcttgcccggctgaaggcgatggacgtggcgcgcggcatgcgggccgagatggag
gcgctgcaggatcggctcgatcgccgcgacctgcccgccggcatgacggaagagctgttg
gaatcgcggatcgaggcgctgtcgaagcatgccaccaagtccggcgacagttcgcgcacc
aaggcgatgctggaacaagcggccaatctggacgtgctgaaccggcgggaggaggaattc
gacgccgatccgctgacgctgaatgtgcggaaccgcacgctgcgcttcgtgcagggcgcc
gatggctgggagttgcgcgacgcgccgcatgatcctgaggatctgctgacgcgacaatgc
gcggctgattgggtgccggaagtggaaaacgccatgtgggtgaagcacatggagaccgtg
ctgcccaatccggacgtgcggtggtttttccagaagctgatgggctattgcgccacgggc
ctgaacgtggagcaaatcttcgtcatcctgcagggcaagggcggcgacggcaaatcgacc
gcgatgaacgcgctgcgcatcgtgctgggcagctatgccgtttccggcaaggtgcagacg
ttcttggacgggccggacaccgatgcaggcggggcgacgcccgagctggtgcgcttcgtg
ggcgacacgcggctgatctcgatccaggagccgaagcggggcaaggccatggccgaagag
cgggtgaagcagttcaccggcggctctccggtgccctatcggccgctgtacggcgcggag
agcgagttcgagcctcgcggcaaggtagtgatggaggcgaacaagcgaccgcgcatcacc
ggcgacgacgacggcatctggcggcgcatcatcatcatgatgtggcggcaccaattcaag
gggcaggccatcgtgaaggggatgcacaaccgcatcctgcgcgaggacaatggcgggccc
agcggcgtgctgaactggatcatcaggggcatcatcggatacctcaacgaagggctggag
cagccgcaagaggtggtggacgcgatcgaggagtatcggcgttcggccaaccctttttcc
gaatgggtgcaggcgatgctcgacatgagcgacccgatggcgcgcgagctttcggcggac
ctgtacggctcctacaagcagtggtgcgaggccgagagcaaggccgataacgagatcatg
aattcgacccgcttcgggcgcgagctgggcgacctgcagatcatcatgtgcggcaaggac
agcaagggcaggaagctgcgccgcggcgcgcggctgcgcaagtccgacgagctgctgccg
cctgccgccgagccccaggaggcgcccgacgatgatgtcccgccgctatga
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