Sphingomonas sp. R1: OIM94_02225
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Entry
OIM94_02225 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_02225
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_02225
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UYY77847
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Position
458706..461009
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AA seq
767 aa
AA seq
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MNGRTVLVLMASASALAGGVAQAQTAPAAPQDNAQLTDEIIVTAQNRAQSVQNVPIAISV
ISGDALKDKGVTDFTSVQKVSPALQVTNDTNNTRVSVRGVGSLTNNEAQDQSIAVNIDGE
YINRPTILNAAIFDLDRVEVLRGPQGTLYGRNSTGGAVNFITRKPGDSFAVNGTASYGNF
NQVLVDGGVDVPLGDVGGVRVAGFYRSHDGYTTHPNTPFSPTSAFTPSKTAESDTDNTGG
GRVSLRLKPAAGFTVDAAVEHVEQTLIPAAQAWQDMASAANNPGSSTTSCANGWAVAYAV
AGGVGCVPKNTNTLSKIDRSNYASPLIGVGSLHQISTAARARIAYDFGPATLTYTGGYRT
TKNNGANTLSPAFVFTNFGGRVKTQSHELRLNGNVHGIEWQTGAFYFREKQNTNGGLYSP
FIGPNGSYVNYFRHPTLSESVSGFAQVEVPLTTQLTAVGGARYTHDVRSATFTNYFFAFN
SGPIELTNQPSASTPLHYSGSKFTWLAGLNYKPNTDTLLYAKVSTGYKAGGFDGTGKTFN
PENNTAYEGGAKLRFSGNNTFNVAGFYYDYKDLQNDVLLNPAVGAQTFNAGSAKIYGVEA
EANLHPSRADTVSIAVNLMHATYRKFQASVAAFTNGVVPTTPQTLELGGNRLPQAPNAIV
SVGWDHVFDLGGAGTITASAYSRYKGNYYLDFYNYNDSKQIGHTQSDFSLEYKPANKHYS
VQAFVRNIENYRLIAYAGNTVVPGVANIYNWQFTPPRTYGVRLGIDF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaggaccgtgctcgtgctgatggcgagcgccagtgcgctggcgggcggggtg
gcgcaggcgcagaccgcgcccgccgcaccgcaggacaatgcgcagctcaccgacgagatc
atcgtcaccgcgcagaaccgcgcgcagagcgtccagaacgtgccgatcgcgatctcggtg
atctccggcgatgcgctgaaggacaagggcgttaccgacttcacctcggtgcagaaggtc
tcgcccgcgctgcaggtgaccaacgacaccaacaatacccgcgtctcggtgcgcggcgtc
ggctcgctgaccaacaacgaggcgcaggaccagtcgatcgcggtcaatatcgacggcgaa
tatatcaaccgcccgaccatcctgaacgccgcgatcttcgacctggatcgcgtggaggtg
ctgcgcgggccgcagggcacgctgtacggccgcaactccaccggcggcgcggtgaacttc
atcacccgcaagcccggcgacagcttcgcggtcaacggcacggccagctatggcaatttc
aaccaggtgctggtggacggcggcgtcgatgtgccgctgggcgatgtcggcggggtccgc
gtcgccggcttctaccgctcgcatgacggctacaccacgcatccgaacacgccgttcagc
cccacctcggccttcacgcccagcaagacggcggagagcgataccgacaataccggcggc
ggccgcgtgagcctgcgcctgaagccggcggcgggcttcaccgtcgacgcggcggtggag
catgtcgagcaaacgctgatcccggccgcccaggcctggcaggacatggccagcgctgcg
aacaatccgggatcgagcaccaccagctgcgccaatggctgggcggtcgcctatgccgtg
gcgggcggcgtcggctgcgtgcccaagaacaccaatacgctatcgaagatcgatcgcagc
aactatgcctcgccgctgatcggcgtgggttcgcttcaccagatctcgaccgcggcgcgc
gcccgtatcgcctatgatttcggcccggcgacactgacctataccggcggctatcgcacc
accaagaacaatggcgcgaacacgctgtcgcccgccttcgtcttcaccaatttcggcggg
cgggtgaagacccagagccacgagctgcgcctgaacggcaacgtccacggcatcgagtgg
cagaccggcgccttctatttccgcgagaagcagaacaccaatggcggcctgtacagcccg
ttcatcggccccaacggctcctatgtgaactatttccgccatccgacgcttagcgaaagc
gtgtcgggcttcgcgcaggtggaagtgccgctcaccacccagctcacggccgtcggcggc
gcgcgctacacgcatgacgtgcgcagcgccaccttcaccaactatttcttcgcgttcaac
agtggtccgatcgagctgaccaaccagccctccgccagcaccccgctgcactattcgggg
agcaagttcacctggctggcgggcctcaactacaagcccaataccgatacgctgctctat
gcgaaggtctcgaccggctacaaggcgggcggcttcgacggtaccggcaagacgttcaac
ccggagaacaacaccgcgtatgaaggcggcgccaagctgcgcttctcgggcaacaacacg
ttcaacgtcgccggcttctactacgattacaaggacctgcagaacgacgtgctgctcaac
ccggccgtgggtgcgcagaccttcaacgccgggagcgcgaagatctacggcgtcgaggcc
gaggccaatctccacccgtcgcgcgcggacaccgtgtcgatcgcagtgaacctgatgcac
gccacctatcgcaagtttcaggcgagcgtggcggccttcaccaacggcgtcgtgccgacg
acgccgcagaccttggagctgggcggcaaccgcctgccgcaggcaccgaacgcgatcgta
tcggtcggctgggaccatgtgttcgatctgggcggcgccggcacgatcacggcttcggcc
tattcgcgctacaagggcaactattatctcgacttctacaactacaatgactcgaagcag
atcgggcacacccagagcgacttcagcctcgagtacaagccggcgaacaagcattatagc
gtgcaggcgttcgtgcggaacatcgagaattatcgcctgatcgcctatgccggcaacacc
gtggtgccgggggtggcgaacatctacaactggcagttcacgccgccgcggacctacggc
gttcgtctcggcatcgatttctga
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