Sphingomonas sp. R1: OIM94_02360
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Entry
OIM94_02360 CDS
T11062
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OIM94_02360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprr03019
]
OIM94_02360
Enzymes [BR:
sprr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
OIM94_02360
Messenger RNA biogenesis [BR:
sprr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OIM94_02360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
UYY77873
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Position
complement(488711..489958)
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AA seq
415 aa
AA seq
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MAQLTLPAADWRERPGLEALTEALGAGEGLCRFVGGAVRDTLLGIPVADIDLATTLDPDA
VMERLRAAGIRVVPTGLQHGTVTAVLDSGPVEATTLRRDVSTDGRHATVAFTDDWREDAA
RRDFTINALYADPRTGALFDYFGGLDDLAARRVRFIGDPLRRIAEDHLRILRFFRFLARF
GDAPDAEGLAACTARARDLMALSRERIRDELLKLLVAPGAVEVVQLMCVHGIFDPVLPEV
TGWAALARSVEREALVGAVPDPIRRLAALLATDPAQADLIGARLKLSNAQRKRLMLASAG
DGTGEPRALAYRIGRESAEDRLLLAEDDAPTLVAGWEQLVGWDIPRLPLTGGALVARGLA
KGPDVARALHRIEDQWIAERFPDSDRVDAIADAVVAQAIAAPISPNAASPATGRE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgacgctgcccgccgccgactggcgcgagcggcctgggcttgaggccctg
accgaggcgctgggtgcaggcgaaggactgtgccgcttcgtgggcggcgcggtgcgcgac
acgctgctcggcatcccggtcgccgatatcgatcttgccacaaccctcgaccccgacgcg
gtgatggagcggctgcgcgccgccggcatccgcgtggtaccgaccgggcttcagcacggc
accgtcacggccgtcctggacagtggcccggtggaagcgacgacgctccgccgcgacgtc
tcgaccgatggacggcacgccaccgtggcgttcaccgatgactggcgcgaggatgccgcc
cgccgcgatttcacgatcaacgcgctttatgccgatcccagaaccggcgcactgttcgac
tatttcgggggactagacgatctcgcggcgcggcgggtgcgcttcatcggggatccgctg
cgccggattgccgaggaccatctgcggatcctccgcttcttccgcttcctcgcacgtttc
ggcgatgcaccggatgccgagggactggcagcctgcacggcgcgcgcgcgcgacctgatg
gcgctcagccgcgaacgcatccgggacgagctgctcaagctgcttgtcgcgcccggcgcc
gtggaagtcgtccagctgatgtgcgtgcatggcatcttcgatccggtgctgccggaagtc
accggctgggcggcgcttgcccggtcggtcgagcgcgaggcgctggtcggtgccgtgccc
gatccgatccgtcgccttgccgcactgctcgccaccgatccggcacaggcagatctgatc
ggtgcccggctcaagctgtccaatgctcagcgcaagcggttgatgctggccagcgccggc
gatgggaccggagagccgcgggccctggcctaccgaatcggccgcgaatccgccgaggat
cgcctgctgctcgccgaggacgatgcgcccacgctggtcgccgggtgggagcagctcgtg
ggctgggatattccccgcctgccgctcaccggtggcgcgctggtcgcccgcggccttgcc
aagggaccggacgtggcgcgggcgctgcaccgtatcgaggaccagtggatcgccgagcgc
tttcccgacagcgaccgcgtcgacgccatcgccgatgccgtggtcgctcaggcgatcgcc
gcgccgatcagtccgaacgcggcatcccccgccaccggacgcgaataa
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