Sphingomonas sp. R1: OIM94_02445
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Entry
OIM94_02445 CDS
T11062
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OIM94_02445 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sprr01007
]
OIM94_02445 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sprr03016
]
OIM94_02445 (serS)
Enzymes [BR:
sprr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
OIM94_02445 (serS)
Amino acid related enzymes [BR:
sprr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
OIM94_02445 (serS)
Transfer RNA biogenesis [BR:
sprr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OIM94_02445 (serS)
Prokaryotic type
OIM94_02445 (serS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
UYY77890
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All DBs
Position
complement(503016..504296)
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AA seq
426 aa
AA seq
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MHDIRFLREHPETFDQGLAKRGLEPQSEALLALDERRRALVTELQAGQARRNEASKAIGA
AKAKKDEDAAAALMAEVTILKERLPMLEAEEKAVGEELDGRLAALPNLPYPDVAQGADEN
DNVFVHERGTLPAFPFAAKEHDAIGPALGLDFETGAGMSGARFTFVRGATARLHRALGQF
MLDTLTGSYGYEECVPPLLVRDEALFGTGQLPKFAEDLFQTTDGRWLIPTAEVSLTNAVR
EKILSEEELPLRLTALTACFRSEAGAAGRDTRGFIRQHQFEKVEMVSITTPDQSEAEHER
MTAAAEDVLTKLGLAFRRMKLCSGDMGFTAARTYDLEVWLPGQDRYREISSCSTCADFQA
RRMNARYRPEGEKGTRFVHTLNGSGLAVGRTLVAVLENYQQENGAVAVPAVLQPYLGGLT
LLEPRG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacatccgcttccttcgcgaacatcccgaaaccttcgaccagggcctggccaag
cgcgggctggagccgcagtcggaggcgctgctggcgctggacgagcgccgccgcgcgctg
gtgaccgagctgcaggccgggcaggcgcgccgtaacgaagcctcgaaggcgatcggcgcc
gccaaggcgaagaaggacgaggatgccgccgcggcgctgatggcagaggtgacgatcctc
aaggaacgcctgccgatgctggaggccgaggagaaggcggtcggcgaggaactggacggc
cggctcgccgcgctgcccaacctgccctacccggacgtggcgcagggcgcggacgagaat
gacaatgtgttcgtgcacgagcgcggcacgcttcccgcctttcccttcgcggcgaaggaa
catgacgcgatcggccccgcgctgggcctcgatttcgagaccggtgcgggcatgtccggc
gcccgcttcaccttcgtgcgcggggcgaccgcccggctgcaccgcgcgctcggccagttc
atgctcgacacgctgaccggcagctatggctatgaggaatgcgtgccgccgctgctggtg
cgcgacgaggcgctgttcggcaccggccagttgcccaagttcgccgaggatctgttccag
accaccgacggccgctggcttatccccaccgccgaggtgagcctgaccaatgcggtgcgc
gagaagatcctcagcgaagaggaactgccgctgcgcctcaccgcgctcaccgcctgcttc
cgctccgaagcgggtgcggcggggcgcgacacgcgcggcttcatccgccagcaccagttc
gagaaggtcgagatggtgtcgatcaccacccccgaccagtccgaagccgagcatgagcgg
atgaccgccgcggccgaggacgtgctgaccaagctgggcctcgccttccgccggatgaag
ctgtgcagcggcgacatgggcttcaccgccgcgcgcacctacgacctcgaagtatggctg
ccgggccaggatcgctaccgcgagatctcgtcctgctcgacctgcgccgatttccaggca
cgacggatgaacgcgcgctaccgccccgaaggcgagaagggcacgcgcttcgttcacacg
ctcaacggctcgggcctggcggtgggccgcacgcttgtcgcggtgctggagaactaccag
caggagaacggcgcggtcgcggtgcccgcggtgctccagccctatctgggcggcctcacc
ctgcttgaaccgcgcggctga
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