Sphingomonas sp. R1: OIM94_02845
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Entry
OIM94_02845 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_02845
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_02845
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
HZS_alpha
Motif
Other DBs
NCBI-ProteinID:
UYY77965
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Position
578478..580949
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AA seq
823 aa
AA seq
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MSLPLIPLLLLSGAVPPMPDPDTPPVAAAPQDQSGDIVVTARRREERIQEVPVAISVLSG
ATLAEAGAFNVARIQQSQPALQFYSSNPRNTAINIRGLGAPFGLTNDGIEQGVGFYVDGV
YIGRVGASTFDFVDVERVEVLRGPQGTLYGKNTTAGAINITTRKPSFTPEVRYEATAGNY
GFLQLKGSASAPIADDKLAVRISTSITRRQGTIYDTKSDTNLHRLDNYGVRGQLLWRAAP
NLDLTLSGDFNLQNPLCCVQYYVRTGATQRPLNRQYAALAAAFGYAPPSTNPFDRKTDLD
ADINSRQEIGGASLVANWDLGSATVTSVSAWRYWDWQPANDRDFVGLPITTVSQNPSQQK
QVSQELRIASNGRNKLDYTAGVFLFHQTIDTQGSQVQGSAASRWLLNPGASVAPGAAGCA
TATTAACNPLVLNGLTSRNTISFDNTSFAVFGKLNWEALPGLRIQPGLRVNYDKKSGSYE
SIVSISNARYNFVATADNAAALLASGAATADQFNTLAPQRYSPKFDQWNVSGDATLSYDF
SRDIHGYATYARSFKSGGINLSGLPLNSTNTAVDLTTQTVKPEKVNHFEIGLKNQFFDRR
VTLNLAGFWTEISDYQATVNNNAINVIRGYLANAGKVRSRGFEWDSSFRPSQRANLYFNG
AYTDAKYTKFTNAPCPPELSGGTAITNPATQTPAAAGTPGFSPSSCNISGQVLPGISKWA
LGFGGEINAPVEGGQVYLGYDGSWRSRFSSNPSPSAYTWIDGYALSNFRLGYRKGKVNAF
AWVRNAFDKRYFELLSVQSGNTGLIVGQPGDPRTWGFTISGSF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgccgctgattccgctgttgctgctgtctggcgccgtcccgcccatgccggat
cccgatacgccgccggtcgcggccgcgccgcaggaccagagcggtgacatcgtcgtcacg
gcccggcggcgcgaggagcgcatccaggaagtgccggtcgccatatcggtgctcagtggc
gcgacgctcgccgaggctggcgcgttcaacgttgcgcgcatccagcagtcgcagcctgcg
ctgcaattctattcgagcaacccgcgcaacaccgcgatcaacatccgcgggctcggcgcg
ccgttcgggctcaccaacgacgggatcgagcagggcgtcggcttctacgtcgacggcgtc
tatatcgggcgcgtcggcgcctcgaccttcgacttcgtcgatgtcgagcgcgtcgaggtg
ctgcgtgggccgcagggaacgctctacggcaagaacaccaccgcgggcgcgatcaacatc
accacgcgcaagccgagcttcacgcccgaggtgcgctacgaagccaccgcgggcaattac
ggcttcctgcagctcaagggatcggcctcggcgccgatcgcggacgacaagctggcggtg
cgcatctccacgtcgataacgcgacgccagggcacgatctacgacaccaagagcgacacg
aaccttcatcgcctcgacaattacggggtgcgcggccagctgctgtggcgcgcggcgccg
aacctggacctgacgctgtcgggcgatttcaatctgcagaacccgctgtgctgcgtgcaa
tattatgtccggaccggcgcgacgcagcggccgctcaaccgccaatatgccgcgctcgcc
gccgcgttcggctatgcgccgccgagcaccaatccgttcgatcgcaagaccgatctcgat
gccgacatcaattcgcgccaggaaatcggcggcgcctcgctggtggcgaactgggacctt
gggagtgcaaccgtcacctcggtgagcgcgtggcgctattgggactggcagcctgccaat
gaccgtgatttcgtcgggcttccgatcaccacggtctcgcagaacccgtcgcagcagaag
caggtctcgcaggagctgcggatcgcctcgaacggccggaacaagctcgattacacggcc
ggcgtcttcctgttccaccagacgatcgacacccaggggtcgcaggtgcagggctcggcg
gcgagccgctggctgctcaatcccggcgccagcgtcgcgcccggcgcggccgggtgcgca
acggcgaccacggctgcctgcaacccgctggtactcaacggactgaccagccggaacacg
atcagtttcgacaacaccagcttcgcggtgttcggcaagctcaactgggaggcgctgccg
ggcctgaggatccagcccggcctgcgcgtcaactatgacaagaagagcggctcgtacgaa
tccatcgtcagcatcagcaatgcgcgctacaatttcgtcgcgacggcagacaatgcggcg
gcgctgctggccagcggcgcggcgaccgcggaccagttcaacacgctggccccgcagcgc
tacagccccaagttcgaccagtggaacgtctcgggcgacgcgaccctttcctatgacttc
agccgcgacatccatggctatgcgacctatgcgcgctcgttcaaatcgggcggcatcaac
ctctcgggactgccgctcaattcgaccaacaccgcggtcgaccttacgacccagacggtg
aagccggaaaaggtcaatcatttcgagatcggcctgaagaaccagttcttcgaccgtcgc
gtcacgctcaacctggccggcttctggaccgagatcagcgactatcaggcgacggtgaac
aacaacgcgatcaacgtgatccgcggctatcttgccaatgccggcaaggtgcgttcgcgc
ggcttcgaatgggattcgtcgttccggccgagccagcgcgcgaacctctatttcaacggc
gcctataccgacgccaaatacacgaagttcaccaacgcgccgtgcccgcccgagctttcg
ggcggcaccgcgatcaccaatcccgccacccagacgccggcggcagcggggacgccgggc
ttcagcccgtcctcgtgcaacatttccggccaggtgctgccgggcatctcgaaatgggca
ttgggctttggcggcgagatcaacgcgccggtggaaggcggccaagtctatctcggctat
gacggcagctggcgctcgcgcttctcgtccaatccgtcgccgtccgcctatacctggatt
gacggctatgcgctgtccaacttccggctgggctatcgcaagggcaaggtgaacgccttt
gcctgggtgcgcaacgccttcgacaagcgctatttcgagctcctctccgtccagtctggc
aataccgggctgatcgtcggtcagccgggcgacccgcgcacctggggtttcacgatcagc
ggttccttctga
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