Sphingomonas sp. R1: OIM94_03420
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Entry
OIM94_03420 CDS
T11062
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sprr03029
]
OIM94_03420 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_03420 (bamA)
Mitochondrial biogenesis [BR:
sprr03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
OIM94_03420 (bamA)
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_03420 (bamA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
UYY78071
LinkDB
All DBs
Position
complement(700757..703513)
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AA seq
918 aa
AA seq
DB search
MVTAIKASNLGARATATLLAGTILSGVVAPAEAQTAAKPAAPATQPQAAPAPVAPAVVRT
IKSLRVEGSQRIEPETVLSYTRLRVGDSYTNETVDQAIKDLLASELLADVVVEGVETGNL
ILRIRENPVINRVVFEGNKRLKQDKIDKEIKLRPRQIFTRTAVRADIARIIELYRRQGRF
AARVEPKMVSLDQNRVDVIFEIHEGAKSKVRQINIIGNEVFGDKKLRAQMATKVASLSHF
LSSNTSYDQDRLAYDQQKLRQFYLTEGYADFRVISAVAELTPDKKDFIITYVVEEGPRYK
FGPVSVDSAIRDFDDKKLAAALPIKEGQWYNAKAVEDTVEQLSETAGLFGYAFADVRPDF
QRNKDALTMSMNFHIGEANRTYVERVEITGNRQTQDKVIRREMRVAEGDAFNTFLVKRSQ
DRINSLGYFQDKFEIERKEGSAPDRIVLGANVEEKPNGELTLSAGFSSLERFILQASIRQ
RNFRGMGQTASISADYSSYSKSVELGFTEPYLFDSNIALGATIFRRDYNAFNYLGTSRNT
TYQQVSTGFQLVAGLPLTEYWTLSGRYYLAKDNVTLDRDTFYTDGVCDPLKAGRYYCEAV
GNRLTSLVGVSLIYDSLNSRLRPTRGQRVSLGADFAGLGGDVKYIRGKIDGAKYWGLGKG
FVFSVTGEGGVIKSLDGSEIRITDRFYLGEPQFRGFDIRGVGPRVQRYYYNGTPTSDPST
NTQILNTARDQIVDDALGGKAYYLTKAELELPLGSGAAELGLRPSIYIMAGSLFSIRKPT
TNTYFTQATDSSGKKLFNSDGSPTLLPKLNYQFDSNGKPVYLVSSGTYSGYTTACSVGYA
AASTDPCVGTSVNSQYYTSTSPFYEVYRGSTASPRVSVGVGVNWNSPFGPLRIDVAKAIV
SQPGDDKKLVTFNVGTQF
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggtgactgcgatcaaggcaagcaatttgggcgcgcgggcgacggctacgctgttggca
gggacgatcctgtcgggcgtggtagcgccggcagaggcgcagaccgcggccaagcccgcg
gcgccggcgacccagcctcaggctgcgccggcaccggtcgcgccggcggtggtgcggacg
atcaagtcgttgcgggtggaaggctcgcagcgcatcgagcccgaaacggttctcagctac
acccgtctccgcgtgggcgacagctacacgaacgagacggtcgaccaggcgatcaaggat
ctcctcgcctccgaactgcttgccgacgtggtggtcgaaggcgtcgagaccggcaatctg
atcctgcgcatccgcgagaacccggtgatcaaccgcgttgtcttcgaaggcaacaagcgg
ctgaagcaggacaagatcgacaaggaaatcaagctccgtccgcgccagatcttcacgcgt
accgcggtacgtgcggacatcgcgcggatcatcgagctctatcgtcgccagggccgcttc
gccgcgcgcgtcgagccgaagatggtcagcctcgaccagaaccgcgtggacgtgatcttc
gagattcacgaaggcgccaagtccaaggtccgccagatcaacatcatcggcaacgaagtg
ttcggcgacaagaagctgcgcgcgcagatggccaccaaggtcgccagcctctcgcacttc
ctcagctcgaacacgtcgtacgatcaggatcgcctggcctatgaccagcagaagctgcgc
cagttctacctgaccgaaggctatgccgacttccgcgtgatctcggcagtggccgagctg
acgccggacaagaaggacttcatcatcacctatgtggtggaggaaggcccccgctacaag
ttcggccctgtttcggtcgacagcgccattcgcgactttgacgacaagaagctcgcggcc
gcgctgccgatcaaggaaggccagtggtataacgccaaggccgtcgaagacacggtggaa
cagctgagcgagaccgccggcctgttcggctatgcctttgccgacgttcgccccgacttc
cagcgcaacaaggatgcgctgacgatgtcgatgaacttccacatcggcgaggcgaaccgc
acctatgtcgagcgcgtggaaatcaccggcaaccgccagacgcaagacaaggtgatccgc
cgcgaaatgcgcgtggcggagggagacgccttcaacaccttcctggtgaagcgctcgcag
gatcgcatcaacagcctcggatatttccaggacaagttcgagatcgagcgcaaggagggt
tcggcgcccgaccgcatcgtgctcggcgccaatgtggaagaaaagccgaacggcgaactg
acgctgtcggcgggcttctcgagccttgagcgcttcatcctgcaggcgtcgatccgccag
cgcaatttccgcggcatgggccagacggcgagcatctcggcagactattcgagctattcg
aagtcggtcgagctgggctttaccgagccctatctgttcgacagcaacatcgcgctgggc
gccacgatcttccggcgcgattacaacgcgttcaactatctcggcaccagccgcaacacc
acctatcagcaggtctcgaccggcttccagctggtcgccggcctgccgctcaccgaatat
tggacgctgtcgggccgctattatctcgccaaggacaatgtgacgctcgaccgggacacc
ttctacaccgacggcgtctgcgatccgctcaaggccgggcgctattattgcgaagcggtg
ggcaaccgcctgacctcgctggtcggcgtctcgctgatctatgacagcctgaacagccgc
ctgcgcccgacccgtggccagcgcgtttcgctcggcgcggatttcgcgggtctcggcggc
gatgtgaagtatatccgcggcaagatcgacggcgccaaatactggggcctcggcaagggc
ttcgtattctcggtcaccggcgaaggcggcgtgatcaagagcctcgacggcagcgagatc
cgcatcaccgatcgcttctatctgggcgagccgcagttccgcgggttcgacatccgcggc
gtggggccgcgcgtgcagcgttattactataacggcacgccgaccagcgatccgtcgacg
aatacccagatcctcaacacggcccgcgaccagatcgtcgacgacgccctcggcggcaag
gcctattacctgaccaaggcggagctggaactgccgctgggttccggtgcggcggagctg
ggtctgcgcccgtccatctacatcatggccggctcgctgttctcgatccgcaagccgacg
acgaacacctatttcacccaggcgaccgactcctcgggcaagaagctgttcaactcggat
ggctcgccgacgctgctgccgaagctgaactaccagttcgacagcaacggcaagccggtc
tatctcgtcagcagcggcacctattcgggctacaccactgcctgcagcgtcggctacgcg
gcggccagcaccgatccgtgcgtcggcacctcggtcaactcgcaatattacacgtcgacc
tcgccgttctacgaagtctatcgcggcagcacggcgtcgccgcgcgtttcggtcggcgtc
ggcgtcaactggaattcgccgttcggtccgctgcggatcgacgtcgcaaaggcaatcgtc
agccagcccggcgacgacaagaagctcgttactttcaacgtagggacccagttctaa
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