Sphingomonas sp. R1: OIM94_04700
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Entry
OIM94_04700 CDS
T11062
Name
(GenBank) L,D-transpeptidase family protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_04700
Transporters [BR:
sprr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OIM94_04700
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
Motif
Other DBs
NCBI-ProteinID:
UYY78307
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Position
976758..978377
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AA seq
539 aa
AA seq
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MDEVKKAMRMKVLGSGGLAALALAGSIATPAAAQFRLIPAPKQTPSATQTAKPAQTQTPA
PRAPQGQSPAAAPVSKQAVPAAPSQPQVTAPPVVAPVLPLPTLTPKQMAELRQLLPEASL
AQGLRRMTSSVTLPNDSDGLVRAALDYARAVHSGRLDSSDFINDWGLRPAAYDPLPDFVD
AVKRDRIAAWMRALPPPYAGYDGLEKGLVAYRKILTGGGWQKLAPGPDLAKGASGARVRA
LRKRLSVEDRQVSATGDLFDQELQDAVLRAQRRYGLRPTGIVSTGTLAALNVPVDDRVRQ
IMANMERWRWLPEQLPAKRIQVNIAAAVMTVFEGDSPIASMKAVTGRPGNETPMLQSRIH
SIVLNPPWNVPSGIAAKELWPKGEAYLKAHGYRIIGTGPDRRLQQESGAKSALGRYKFDF
DNPYAVYLHDTPVQSGFNSYSRLDSHGCVRLEKPGPLAELLLKNDPNWQPDAIAAQLEGT
KTVRVRLPETEQVAVYLLYWTAFAGSDGMMSFRDDPYSWDKLLAEKIEARAAVSASSAS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaagtgaagaaggcgatgcggatgaaagtgctgggcagcggaggcttggcggcg
ttggcgctcgccggttcgatcgcaacgccggccgcagcgcagttccggctgattcccgcg
cccaagcaaacgccgtccgccacccagaccgccaagccggcgcagacgcagacccccgcg
ccacgcgcgccgcagggtcagtccccggccgcggcgcccgtatcgaagcaggcagttccc
gctgcgccgtcgcagccacaggttaccgcgccgccggtggtggcgcccgtactgccgctg
ccgacgctaacgcccaaacagatggccgagctgcgccagttgctgcccgaggcgagcctc
gcccagggcctgcggcggatgaccagtagcgtcaccctgcccaacgacagcgacggcctg
gtccgcgcggcgctcgattatgcgcgggcggtccattcgggccgtctcgacagcagcgac
ttcatcaacgactggggtctccgcccggccgcctatgatccgctccccgacttcgtcgat
gcggtgaagcgggatcgcatcgccgcatggatgcgcgcgctgccaccgccctatgccgga
tatgacggcctcgaaaaggggctggtcgcctatcgcaagatcctgaccggcggcggctgg
cagaaactcgcccccggcccggacctcgccaagggcgcgagcggcgcccgcgtccgcgcg
ctccgcaagcggctgtcggtcgaggaccggcaggtttccgcgaccggcgacctgttcgat
caggaactgcaggacgcggtcctgcgcgcccagcgccgctacggcctgcgcccgactggc
atcgtctccaccggtaccctcgccgcgctcaacgtgcccgtcgacgatcgcgtgcgccag
atcatggcgaatatggagcgctggcgctggctgcccgaacagctgccggccaagcgaatc
caggtgaacatcgcggcggccgtgatgaccgtgttcgaaggcgacagcccgatcgcgtcg
atgaaggcggttaccggccgtccgggcaacgaaaccccgatgctgcagtcacgcatccac
tcgatcgtgctcaatccgccctggaacgtgccgagcggcatcgcggccaaagagctgtgg
cccaagggcgaggcctatctgaaggcgcatggctatcggatcatcggcaccggtccggat
cgtcgcctgcagcaggaatcgggcgcgaagagcgcgcttggtcgctacaagttcgacttc
gacaacccctatgccgtctatctgcacgacacgccggtacagtcgggcttcaacagctac
agccggctggacagccatggctgcgtgcgcctggaaaagccgggcccactcgccgaattg
ctgctgaagaacgatccgaactggcagccggacgcgatcgccgcccagctggaaggcacc
aagacggtgcgggtgcgcctgccggagaccgaacaggtcgcggtatacctgctgtactgg
accgcgttcgccggatcggacggcatgatgagcttccgcgacgatccctatagctgggac
aagctgctcgccgagaagatcgaagcgcgcgccgccgtcagcgcgtccagcgcctcctga
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