Sphingomonas sp. R1: OIM94_05630
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Entry
OIM94_05630 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_05630
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_05630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF905
Motif
Other DBs
NCBI-ProteinID:
UYY78479
LinkDB
All DBs
Position
complement(1166156..1169206)
Genome browser
AA seq
1016 aa
AA seq
DB search
MNSAYVSLRYGISTAALLTAIAVPAFAQDTTPASAPSAAAEQTVAPQDPAAQAQQGAAET
AAQTDAPQPATIVVTGTLFRDSNASSISPVTVLSSETLQRANITTAQDAIRSVSADSAGS
ISTGFRNGFSAGGAAVSLRGLGVSSTVVLIDGLRSANFPLNDDGHNAYVDLNSIPFSIVD
RIEVLKDGASSTYGADAIGGVVNLISKKNFQGVEGSVQGGTTEQGDGSHYRATLTAGTGD
YQQQGWNFYVNGEYTYDGYITNSSRGYPFNTLDLTPSGLTDRNRNDDSLTTANPQAVVTR
VSQSDLNNPLAGKVGAPLTSQYQLLNPNACPFGTFTVTSGAAQGTGCKHNLPDEYSIIQP
KQQRYSTTARLTARLADNLEAFASASYSHSEVSIKGTPAAIRATQPFGGSASLASSSPGI
VLPVYVCSAGINCATAADRKLNPNNPYAAAYANDPSNGAARIYYLFGDIPAGSFRYVDVF
RTTAGISGSFGNGFKFRLNGVYARDNFAVTQRGFVNIQGLLSAINTGAYNFVNPEQNTAA
VRNQISPEVTTPSYSTVATIGGSLIKSVMQLGGGDLNMGGGFQIRRETLMNRNQNASLAF
YGLNTSSAQGRQTVTAGFFEIDAPFTRTLDLNVSGRYDHYSQGYSHFSPKVGVKFNPIDA
VAFRATYSQGFRAPTFAENNAASSYAGFSSFTPPASFVAAHPGNSAYTSSYNIGSGARGN
PDILPEVSQSFTFGTILKPARWFNMTVDYYNIKKSNLIVSGPLRAEAIAAYYSKTNSTDG
CAALAAVGAGYKCNVIDAPDPANPGALPRLLVFDVPYVNANYQVSSGIDMQASARIRIAN
NVRLISRIDVTRVLRLDLVTPSGVVQKYAGTLGPYELSSGGGTPRIRGNWQNAFEIGKFS
LTATTYYVGRIKQVAADEITPVNGVIDLSCANSMAPVPAGTPKTYQCWIRPFIYADLNAA
VKVNDKFRFFINVQNFTNARAPLASAAYTSNPNYLSSWHYAGLVGRNFSAGANITF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgcatatgtctcgctgcggtatggtatctcgacggcggcactgctgacggca
atcgccgtccccgcatttgcacaggatacgacgccggcgtccgcgccaagtgctgccgcg
gagcagaccgttgcaccgcaggatcccgccgcgcaggcgcagcagggggctgccgaaacc
gcggcccagaccgatgcgccgcagccggccaccatcgtcgtcaccggcacgctgttccgc
gattcgaacgccagctcgatctcgccggtgacggtgctgagctcggagaccctccagcgg
gccaacatcaccacggcccaggacgcgatccgctcggtctcagccgacagcgccggctcg
atctccaccggcttccgcaacggcttctcggccggcggtgccgcggtgtcgctgcgcggc
ctcggcgtgtcgtcgaccgtcgtgctgatcgacgggctgcgctcggccaatttcccgctg
aacgacgacggccataacgcctatgtcgatctcaactcgatcccgttcagcatcgtcgac
cgcatcgaagtgctgaaggacggtgcctcgtcgacctatggtgcggacgcgatcggcggc
gtggtaaacctgatcagcaagaagaatttccagggcgtggaaggctcggtccagggcggg
accaccgaacagggggatggctcgcactatcgcgcaacgctgaccgccggcaccggggac
tatcagcagcagggctggaacttctacgtcaacggtgaatacacctatgacggctacatc
accaacagctcgcgcggctatccgttcaacacgctcgatctgacgccgagcggcctgacc
gaccgcaaccgcaacgacgactcgctcaccaccgccaatccgcaggcggtcgtcacccgc
gtctcgcagagcgacctcaacaacccgctcgccggcaaggtgggtgccccgctgaccagc
cagtatcagctgctcaatccgaacgcctgccccttcggcaccttcacggtgaccagcggc
gccgcccagggcaccggttgcaagcacaatctgcccgacgaatacagcatcatccagccc
aagcagcagcgctattcgaccactgcgcgtctcaccgcgcgcctggcggacaatctggaa
gcgttcgcgtcggccagctattcgcattccgaagtcagcatcaagggcacgcccgctgcc
atccgtgcgacgcagccgttcggcggctccgcctcgctcgcctcgagcagcccgggcatc
gtcctgccggtctatgtctgctcggcgggcatcaactgcgccaccgcagccgaccgcaag
ctgaacccgaacaacccctatgccgccgcctatgcgaatgatcccagcaacggcgctgcc
cgcatctattatctgttcggcgacattccggccggcagcttccgctatgtcgacgtcttc
cgcacaaccgcgggcatctcgggcagcttcggcaacgggttcaagttccgcctcaacggc
gtctatgcccgcgacaacttcgccgtcacgcagcgcggcttcgtcaacatccagggcctg
ctgagcgcgatcaacacgggcgcgtacaacttcgtcaacccggagcagaacaccgcggcg
gtccgcaaccagatctcgcccgaggtgacgacgccgtcctattcgacggtggcgacgatc
ggcggctcgctgatcaagtcggtgatgcagctgggcggcggcgacctcaacatgggcggc
ggcttccagatccgtcgcgagacgctgatgaaccgcaaccagaatgcgagcctcgccttc
tacggcctcaacacctcgtcggcccagggtcgccagacggtgaccgccggcttcttcgaa
atcgacgcgccgttcacccgcacgctcgacctgaacgtgtcgggccgctacgaccattat
tcgcagggctacagccacttctcgccgaaggtgggcgtgaagttcaatccgatcgatgca
gtcgccttccgcgcgacctattcgcagggcttccgcgcgccgaccttcgccgaaaacaat
gccgccagcagctatgcgggcttctcgtccttcacgccgccggcaagcttcgtcgcggcg
catccgggcaactcggcctataccagcagctacaacatcggcagcggcgcgcgcggcaac
ccggacatcctgccggaagtctcgcagagcttcaccttcggcacgatcctgaagccggcc
cgctggttcaacatgacggtcgactattataacatcaagaagtcgaacctgatcgtcagc
ggcccgctgcgtgccgaagccatcgccgcctattacagcaagaccaattcgaccgatggc
tgcgccgcgctggctgccgtcggtgccggctacaagtgcaacgtgatcgatgcgccggat
ccggcgaaccccggcgcgctgccccgcctgctggtgttcgacgtgccctacgtcaacgcc
aactaccaggtcagctcgggcatcgacatgcaggcgagcgcccgtatccggatcgccaac
aatgtccgcctgatcagccgtatcgacgtgacccgcgtcctgcgcctcgatctcgtcacg
ccgtcgggcgtggtgcagaaatacgccggtacgctcgggccgtacgaactctcctcgggc
ggcggcaccccgcgcatccgcggcaactggcagaatgcgttcgagatcggcaagttctcg
ctcaccgcgacgacctattatgtgggtcgcatcaaacaggtcgcggccgacgagatcacc
cccgtcaacggcgtgatcgacctgtcctgcgcaaactcgatggcgccggtgcccgccggt
accccgaagacctaccagtgctggatccgcccgttcatctatgcggacctgaacgccgcg
gtgaaggtgaacgacaagttccggttcttcatcaacgtgcagaacttcaccaatgcccgc
gcgccgcttgcatcggcggcgtacaccagcaaccccaactatctgagcagctggcactat
gccggtctggtcgggcgcaacttcagcgcgggtgccaacatcaccttctga
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