Sphingomonas sp. R1: OIM94_05675
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Entry
OIM94_05675 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_05675
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_05675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UYY78488
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Position
1182514..1185201
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AA seq
895 aa
AA seq
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MKSKFLALTAVSMAAIATPALAQEQAAAESATAAPQDDTQPNDIIVTGYRQSLRTSLAAK
RNADRVVEELAAEDLGKLPEASIAESLARLPGLATNRDRGNGTQISIRGMGPNLVNTLLN
GREIASAEGSRNIRYEQFPAELLTGASVYKTPTGSQVEGGLAGQVDLKTVRPLDYKETKI
ALNARAIYSDLAKDVTDTSPWGYIASASVVTQLLDDTLGLAVGYSGRRQSVATVRTNIFR
YQNSFADLDGNGSGAPGHGGAAQDDIPYGYEALERGGDDIRHGAVAAVQWRPSDRLELNG
DFLYSHVSFEETQRGFRVGSLAFGNNITGVTTRNGYVTGATITGVQDYGQTINGVNENFF
FKDDLYAGGMNAVWRPADGWKLSGDVGYSTTTRNQQYLTLQTDPFNFRPSATFRSGNDSV
PVMSFNTSLTDPSLFRVARFQIPNGGAARIKDDLLTLTGDIQREIGAGPLAAIRFGVRHT
ERTKTYKAMSQFGDIAAANRTVLDPSLINGTYRFKGEFAGLPAIQSIDIYRTVERLFGRI
NPQESIFDSTSSWRVEEKTSALYGQVDLDGALFGVPFTGNVGLRVVRTETDSRSTALSQN
ASATVVTPIRVRNDFYDWLPSLNLTFKPTSKLQIRFAASEAIARPPLDDLNAGSGLFDFG
TPNASGGNPLLEPFRAKQLDATVEWYFDRDSALTISGFYKDLGTYITRQVTERTLPDANG
IPRTVAFTQPVNGNGGTIKGVEVGLQKAFTFLPAPFDGFGVNLNYSYTDSDITVTEADNA
LGATPLPGLSKHVGNASLYFNKWGFEARIAGRYRSAYVTELGDTDRILFNAPETVLDFYT
SYEFPWDSKLRGVKLMFQANNLTDEPFETYYGDRALQGRFEKFGRRFLMGVGYTF
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcgaaattcttggcgctcactgcggtgagcatggcggcgatcgcgacccctgcc
ctcgcgcaggaacaggcagccgccgagagcgcgaccgcggccccgcaggatgacacgcag
ccgaacgacatcatcgtcacgggctatcgccagtcactgcgcacctcgctggcggcaaag
cggaatgccgaccgcgtggtggaagaactcgccgccgaggatctcggcaagctgcccgag
gcgtcgattgccgaatcgctcgcgcgcctgcccggtctcgccaccaatcgcgatcgcggc
aacggcacgcagatctcgatccgcggcatggggccgaacctggtcaacacgctgctcaac
ggccgcgagatcgcctcggccgaaggcagccgcaacatccgctacgaacagttccccgcc
gaactcctcaccggcgcatcggtatacaagacgccgaccggatcgcaggtcgaaggcggg
ctcgccggccaggtcgacctgaagacggtgcgcccgctggactataaggaaaccaagatc
gcgctgaacgcgcgcgcgatctacagcgatctcgccaaggacgtgaccgacacgtcgccc
tggggatatatcgccagcgcctcggtggtcacccagctgctcgacgacacgctgggcctt
gccgtcggctattcgggccggcgccagtcggtggcgacggtccgcaccaacatcttccgc
tatcagaacagctttgccgacctcgacggcaacggcagcggtgcgcccggccatggcggc
gcggcgcaggacgacattccctatggctatgaagcgctcgagcgcggcggcgacgacatc
cgccacggcgcggtcgcggccgtccagtggcgcccgagcgaccggctcgagctcaacggc
gacttcctctacagccatgtctcgttcgaggagacgcagcgcggcttccgcgtcggcagc
ctcgctttcggcaacaacatcaccggcgtaaccacccgcaacggctatgtcaccggcgcc
actatcaccggcgtgcaggactatggccagaccatcaacggcgtgaacgagaacttcttc
ttcaaggacgatctctacgccggcggcatgaatgcggtgtggcgccccgccgacggctgg
aagctgagcggcgacgtcggctactccacgacgacccgcaaccagcaatatctgacgctg
cagaccgatccgttcaacttccgccccagcgccaccttccgctcgggcaatgacagcgtc
ccggtgatgtcgttcaacacgagcctcaccgatccctcgctgttccgcgtcgcgcgcttc
cagatccccaatggcggtgccgcgcggatcaaggacgatctgctgacgctgaccggcgac
atccagcgcgagatcggcgcagggccgcttgcggcgatccgcttcggcgtgcgccacacc
gagcgtaccaagacctacaaggcgatgtcgcagttcggcgacatcgcggcggccaaccgc
acggtgctcgatccgtcgctgatcaacggcacctatcgcttcaagggcgagtttgccggg
ctgccggcgatccagtcgatcgacatctaccgcaccgtcgagcgcctgttcggccggatc
aacccgcaggaaagcatcttcgacagcaccagttcgtggcgcgtcgaggagaagacttcg
gcactctatggccaggtggatctggacggggcactgttcggcgtgccgttcaccggcaat
gtcggcctgcgcgtcgtgcgcactgaaacggactcgcgcagcaccgcactgtcgcagaat
gccagcgccaccgtcgtcacgccgatccgcgtccgcaacgacttctatgactggctgccc
agcctcaacctcaccttcaagccgaccagcaagctgcagatccgcttcgcggcgagcgag
gcgatcgcgcggccgccgctcgacgatctcaacgccggctcgggcctgttcgacttcggc
acgccgaacgccagcggcggcaacccgctgctcgagccgttccgcgccaagcagctcgat
gccacggtcgaatggtatttcgatcgcgacagcgcgctgaccatttccggcttctacaag
gacctgggcacctacatcacccgccaggtgaccgagcgtaccctgcccgatgcgaacggc
attccgcgcaccgttgccttcacccagccggtcaacggcaatggcggcacgatcaagggg
gtcgaggtcgggctgcagaaggcgttcaccttcctgcccgcgcccttcgacggcttcggc
gtgaacctcaactacagctataccgacagcgacatcaccgtgacggaggcggacaatgcg
ctgggcgcgacgccgctgccgggcctgtcgaagcatgtcggcaatgcctcgctctacttc
aacaaatggggcttcgaggcgcgcatcgcgggccgctatcgctccgcctatgtcaccgag
ctgggcgacaccgaccgcatcctgttcaatgcgcccgaaacggtgctggacttctacacc
agctacgaattcccctgggattcgaagctgcgcggcgtgaagctgatgttccaggcgaac
aacctgaccgacgaaccgttcgagacctattatggcgatcgcgcgctgcagggccggttc
gagaagttcggccgccgcttcctgatgggcgtggggtacaccttctga
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