Sphingomonas sp. R1: OIM94_05715
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Entry
OIM94_05715 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_05715
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_05715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UYY78496
LinkDB
All DBs
Position
1191657..1194035
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AA seq
792 aa
AA seq
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MKVGAGISAMAASLLLVASAAAQTRAPVDPSGEDTSSPNAAPILVTARLRPEDAQRVPGA
LSVVDGGLLDQSYTVNTQGLATLIPSLAYSSANPRNTAFTIRGLGSSVVAVSQANDGLEP
GVGFYVDQVYHARPATAAFDFADIGQVEELRGPQGTLFGKNTTAGAISITTRKPSFTPEG
VAELSYGSFNFVQAKAWVSGPISDTLAFRLSGVSTRRDGVLDNVRTGVAANTLGTQAVRG
QLLYQPSAIFSLRLIADVTNFDAYCCTQVYLRVGQSLRPASRQYGGPAGLAAQFGYAPPS
TDPYDRKTDIDGPLGVNTNEGGASAIADWKLGGHTLTSVSAWRFWNWDAENDRDYTGLPI
QRSQHIPSRQDQFSQELRLASESERPLGYVVGLYGFHQRILGRPISIYGPAAAGWLIGPT
TGTNAIPVPANLLDGYGQDGRTDFRSASVAAFGEANWRIAPRLTATAGLRYTYEEKDGSY
ATTVSGGPAVTSTALINARLSVLRPQRYTAHDRDGSVSGRANLAWQVRPSMMAYASVARG
FKSGGLNMSGLPLDNQNQPVLATAVVRPERNTSYEIGLKTDWWGRRITFNIDGYYTRVRD
FQATVVDSSQTVALRGYLSNIPAVTVKGIEADLSLRPLAGLAARASLAYADGRYSDYPAG
PCPLEVQGTATTACSLTGQRLASLPRIAVTGGVDYALPIGRDAALLHVDVVGRSGFNGDP
SLSRYTRIEGYTLTNASLGWRFGGGLEVVVFARNLFDTRYIQNLTIQAGNSGLILGTPGD
PRVVGGTLRLRR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcggcgccgggatttccgcaatggcagcgtcgctgctgctggtggcatccgca
gccgcgcagaccagggcgcctgtagatccgtccggcgaagacacatcctctcccaatgcc
gccccgatcctcgtcactgcccggctgcgcccggaggatgcgcagcgcgtgccaggcgcg
ctctcggtggtggacggaggcctgctcgaccagagctatacggtgaacacgcaagggctc
gccacgctgatccccagcctcgcctacagctcggccaatccgcgcaacaccgccttcacc
atccgcggcctcggctccagcgtggtggcggtcagccaggcgaatgacgggctcgagccg
ggggtcggcttctatgtcgatcaggtctaccacgcccgccccgctaccgccgccttcgac
ttcgccgacatcggccaggtggaggaactgcgtggcccccagggcacgctgttcggcaag
aacaccacggcgggcgcgatcagcatcacgacgcgcaagcccagcttcacgcccgagggc
gtggccgagctgtcctacgggtcgttcaacttcgtgcaggccaaggcctgggtgtccggc
ccgatcagcgacacgctcgccttccgcctctccggcgtctccacccgacgcgacggggtg
ctcgacaatgtccgcaccggcgtcgccgccaacacgctcggcacccaggcggtgcgcggc
cagttgctctaccagccgagcgcgatcttctcgctgcgactgatcgccgacgtgaccaat
ttcgatgcctattgctgcacccaggtctatctgcgcgtcggccagagcctgcgccccgcg
agccgccaatatggcggtcccgcaggccttgcggcgcagttcggctacgcaccgcccagc
accgatccctatgatcgcaagaccgatatcgacgggccgctgggggtgaacaccaacgag
ggcggcgccagcgccatcgccgactggaaactgggcggccacacgctcacctcggtctcg
gcctggcgcttctggaactgggacgcggaaaacgaccgcgactataccgggctgccgatc
cagcgctcgcagcatatcccttcgcggcaggaccagttcagccaggaactgcgcctggcc
tcggagagcgagcgccccctcggctatgtcgtcgggctctacggctttcaccagcggatc
ctcggccggccgatcagcatctacggccccgccgccgccggctggctgatcggcccgacc
accggcaccaacgccatacccgtgccggccaacctgctcgacggctatggtcaggatggg
cgcaccgatttccggagcgcgagcgtcgcggcgttcggcgaggcgaactggcggatcgcg
ccgaggctcaccgctaccgccggcctgcgctacacctatgaggaaaaggacggcagctac
gccactaccgtctcgggcggcccggccgtcaccagcaccgcgctgatcaacgcccgcctc
tccgtcctgcgcccgcaacgctacaccgcgcacgaccgggacggcagcgtatcgggccgc
gccaatctggcctggcaggttcgaccctcgatgatggcctatgccagcgtcgcgcgcggc
ttcaagtcgggcgggctcaacatgtcgggcctgccgctcgacaaccagaaccagcccgtg
ctcgccacggcggtcgtccggcctgagcgcaacaccagctacgagatcgggctgaagacc
gactggtggggccgtcgcatcaccttcaatatcgacggctattacacccgggtccgcgat
ttccaggcgacggtggtcgattccagccagacggtggcgctgcgcggctacctgtccaac
atcccggcggtgacagtgaaggggatcgaagcggacctgagcttgcggccgctcgccggc
ctcgccgcccgcgcgtcgctcgcctatgcggatggccgctacagcgactatccggccggc
ccctgtccgctggaggtgcagggcaccgccacgaccgcctgcagccttaccgggcagcgg
ctcgcctccctcccccggatcgcggtgacgggcggggtggactatgcgctgccgatcggg
cgcgacgccgcgctgctgcatgtcgatgtcgtcgggcgaagcgggttcaatggcgatccc
agcctgtcgcgctacacccgtatcgaaggctataccctcaccaatgccagcctgggctgg
cgcttcggcggcgggctggaagtggtggtgttcgcccgcaacctgttcgacacccgctac
atccagaacctcacgatccaggccggcaattcgggcctgatccttggcacgccgggcgat
ccacgggtcgtcggagggacgctccggctgcggcgttga
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