Sphingomonas sp. R1: OIM94_06125
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Entry
OIM94_06125 CDS
T11062
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00071
Fatty acid degradation
sprr00362
Benzoate degradation
sprr00650
Butanoate metabolism
sprr01100
Metabolic pathways
sprr01120
Microbial metabolism in diverse environments
sprr01200
Carbon metabolism
sprr01212
Fatty acid metabolism
Module
sprr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
OIM94_06125
09103 Lipid metabolism
00071 Fatty acid degradation
OIM94_06125
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OIM94_06125
Enzymes [BR:
sprr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OIM94_06125
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
F420_oxidored
Semialdhyde_dh
ApbA
Pyr_redox
Trehalase
Motif
Other DBs
NCBI-ProteinID:
UYY78565
LinkDB
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Position
1284927..1286951
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AA seq
674 aa
AA seq
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MSVITTSRQGDVLILTSDNPPVNALGAAVRQGLQAGIEEAKGDDSIKAVVIICAGKTFFA
GADITEFGKAMAEPSLPVLVDQIEALDKPVIAAVHGTALGGGCEVALASHYRIAVPSAKF
GLPEVKLGILPGAGGTQRMPRVAGVEVALEMATKGDPISATQAKDAGLVDRLAGEDSLLA
DAVAFANEVVGQPVSRSSERPVAVDAETFAKFRATNAKRFRGLDAPNTIIDIIEQTAGKP
YAEGVQAERMGFMKLIMGQQSAALRHIFFAERKAAKIDGIADDIQLRDIRRVGVIGAGTM
GGGISMNFLSAGVPVTIVEMAQDALDRGTSVMRKNYEATAAKGRMTAEQVEKAMGLLKPT
LNFDDLAECDLIIEAVYESMDVKKDVFGRLDKIAKPGAILASNTSYLNIDEIAASTSRPQ
DVVGLHFFSPANVMKLLEIVRGAKTADDVLSTAMALSKKIKKVAVIAGVCYGFIGNRMLM
PRQVEATKMLLEGATPEQIDKVHVAFGMPMGPFQMADLAGVDIGWHRDPNRIENIRDALA
AEGRWGQKKGAGFYDYDEKRQPSNSPRVAELIEEWRGKLGVPSHEITEEEIVVRTLYTMV
NEGALILAEGMAQRASDIDVVWVYGYGWPPYRGGPMLWADTEGLKKIVEGLEKYGFEVAP
LLREKAEKGEKFNR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgattaccaccagccgtcagggcgatgtcctgatcctcacctccgacaatccg
ccggtgaacgcgctcggcgcggcggtgcggcaggggctgcaggccggcatcgaggaagcc
aagggtgacgacagcatcaaggcggtcgtcatcatttgcgccggcaagaccttcttcgca
ggcgccgacatcaccgagttcggcaaggcgatggccgagccgtcgctgccggtgctggtc
gaccagatcgaggcgctcgacaagccggtgatcgccgccgtccacggcaccgcgctcggc
ggcggctgcgaggtggcgctggcgtcgcactatcgcatcgcggtgccctcggcgaagttc
ggcctgcccgaagtgaagctgggcatcctccccggtgcgggcggcacccagcgcatgccg
cgcgtcgccggcgtcgaagtcgcgctggagatggcgaccaagggcgatccgatctcggcc
acccaggccaaggacgccggcctggtcgaccggctcgcgggcgaggacagcctgctcgcc
gacgccgtcgccttcgcgaacgaagtggtcggccagccggtctcgcgctccagcgagcgc
ccggtcgccgtcgatgcggagaccttcgccaagttccgcgcgaccaacgccaagcgcttc
cgcgggctcgacgcgccgaacacgatcatcgacatcatcgagcagaccgccggcaaaccc
tatgccgaaggcgtccaggccgagcgcatgggcttcatgaagctgatcatgggccagcag
tcggcagcgctgcgccacatcttcttcgccgagcgcaaggccgccaagatcgacggcatc
gccgacgacatccagctgcgcgacattcgccgcgtgggcgtgatcggcgccggtacgatg
ggcggcgggatcagcatgaacttcctctcggcgggcgtgccggtgaccatcgtcgagatg
gcacaggacgcgctcgatcgcggcacgagcgtcatgcgcaagaattacgaggcgaccgcc
gccaagggtcgcatgaccgccgagcaggtcgagaaggcgatgggcctgctcaagccgacg
ctcaacttcgacgatctcgccgagtgcgacctgatcatcgaggccgtctatgagagcatg
gacgtgaagaaggacgtgttcggccggctcgacaagatcgccaagccgggcgcgatcctc
gcctcgaacaccagctatctcaacatcgacgagatcgccgccagcaccagccgcccgcag
gacgtggtggggctgcacttcttctcgccggccaatgtgatgaagctgctcgagatcgtc
cgcggcgccaagaccgccgacgacgtgctgtccaccgcgatggcgctcagcaagaagatc
aagaaggtcgcggtgatcgcgggcgtctgctacggctttatcggcaaccgcatgctgatg
ccgcgccaggtggaagccaccaagatgctgctcgaaggcgccacgcccgagcagatcgac
aaggtccatgtcgccttcggcatgccgatggggccgttccagatggccgaccttgccggc
gtcgacatcggctggcaccgcgatcccaaccgcatcgagaacatccgcgacgcgctcgcc
gccgagggccgctggggccagaagaagggtgccggcttctacgactatgacgagaagcgc
cagccctcgaacagcccgcgcgtcgccgaactgatcgaggaatggcgcggcaagctgggt
gtgccgagccacgagatcaccgaggaggagatcgtcgtccgcacgctctacaccatggtc
aacgaaggcgcgctgatcctcgccgagggcatggcccagcgcgcgagcgacatcgatgtg
gtctgggtctatggctatggctggcccccgtaccggggcgggccgatgctctgggccgac
accgagggcctgaagaagatcgtcgagggtctcgagaagtacggcttcgaagtcgccccg
ctgctccgcgagaaggcggagaagggcgagaagttcaaccggtaa
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