Sphingomonas sp. R1: OIM94_06395
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Entry
OIM94_06395 CDS
T11062
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00330
Arginine and proline metabolism
sprr00480
Glutathione metabolism
sprr01100
Metabolic pathways
sprr01110
Biosynthesis of secondary metabolites
sprr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
OIM94_06395
09106 Metabolism of other amino acids
00480 Glutathione metabolism
OIM94_06395
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
OIM94_06395
Enzymes [BR:
sprr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
OIM94_06395
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UYY78614
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Position
1334492..1335718
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AA seq
408 aa
AA seq
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MHKHHRALGLATTRIGNRVADIAKLRPVQPVTLVRPHAASRAARFFAEKFPGRSMYAVKA
NPSPDLIQILWESGITHFDVASIAEVRLVAGVAPEATLCFMHPVKAEEAIAEAYFEHGVR
VFSLDSMEELDKIVRATKGATDLTLCVRLRVSSDHSKLSLASKFGVGPGESKDLLIAVRQ
VADALGICFHVGSQAMSPEAYANAMERARAAIVEAGVTVDVVDVGGGFPSSYPGMEPPPL
ERYFATIHRAFESLPISYSAELWAEPGRALCAEYSSLIVRVERRRGDELYINDGAYGALF
DAAHIGWRFPVRLLREPDSNAKDMGFSFYGPTCDDMDRMAGPFELPADIQAGDYIEIGML
GAYGAAMRTGFNGFTAGDTVIVDDEPMVSLYTGEDEAAAAAPSNVVKL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
ttgcacaagcatcatcgcgcgctggggttagcgaccacccgtatcggcaaccgcgttgcc
gacatcgctaagcttcgtccggttcagccggtaacgctcgtccgcccgcacgccgcatcg
cgtgcggcccggttcttcgccgagaagttcccgggtcgttcgatgtatgccgtgaaggcc
aatccctcgccggatctgatccagatcctgtgggagagcggaattacgcatttcgacgta
gcatcgatcgccgaggttcgcctcgtcgccggtgtcgcgccggaagcaaccctgtgcttc
atgcacccggtaaaggctgaggaagccatcgccgaggcgtatttcgagcacggcgttcgc
gtattcagcctggacagcatggaagagctggacaagatcgtacgcgccaccaagggcgcc
accgatctcacgctgtgcgtacgcctccgcgtctcgtcggatcactcgaagctgagcctc
gcgtcgaagttcggcgtgggtccgggcgagagcaaggacctgctgatcgcggttcgccag
gtggcggatgctctgggcatctgcttccatgtcggcagccaggcgatgtcgccggaagcc
tatgccaatgcgatggagcgcgcccgcgccgccatcgtcgaggcgggcgtcacggtcgat
gtcgtcgatgtcggcggcgggttcccgtcgagctatcccggcatggagccgccgccgctc
gagcgctatttcgcgacgatccaccgcgccttcgaaagcctgccgatttcctattcggca
gagctgtgggccgagccgggccgtgcgctgtgcgccgaatacagctcgctgatcgtgcgc
gtcgagcgtcgtcgcggcgatgagctgtacatcaacgacggcgcgtacggcgcgctgttc
gatgcggcgcatatcggctggcgcttcccggtccgcctcctccgcgagccggattcgaac
gccaaggacatgggcttcagcttctacggccccacctgcgacgacatggatcgcatggcg
ggcccgttcgagctgccggccgacatccaggcgggcgactatatcgagatcggcatgctc
ggcgcgtacggcgcggcgatgcgcaccggcttcaacggcttcaccgccggcgacacggtg
atcgtcgacgacgagccgatggtctcgctctacaccggcgaagacgaggcggctgccgcc
gcgccgtcgaacgtcgtcaagctgtaa
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