Sphingomonas sp. R1: OIM94_07325
Help
Entry
OIM94_07325 CDS
T11062
Name
(GenBank) PAS domain S-box protein
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OIM94_07325
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sprr01001
]
OIM94_07325
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sprr02022
]
OIM94_07325
Enzymes [BR:
sprr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
OIM94_07325
Protein kinases [BR:
sprr01001
]
Histidine kinases
LuxR family [OT]
OIM94_07325
Two-component system [BR:
sprr02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
OIM94_07325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
HATPase_c
PAS_9
PAS_3
PAS_4
PAS_8
HisKA
HATPase_c_5
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
UYY78782
LinkDB
All DBs
Position
1514714..1517374
Genome browser
AA seq
886 aa
AA seq
DB search
MARILAIFALACSVVVLGGWTFDLPLLQRFLPRTYPMWPINAVGYASLAIGLLLTQTERD
SLARPFYGVALAIGALGTAQPLIGDWLDLGTLLFPGKVAATGLESAGRPGVNAIVYLLML
PIAAFAAHGRSRLLRDVAPLIAMAPLALALASATAMMLASHASIVNAGLRASVPGTIIAM
ALTGAILLGPGPARADVRRFGRIERSDPLSIQTIVAGAILLPTLPATFELLLERTHQGAP
APGHLVLALFNVLAVGLIAYWAVHRVGVEQSARAELSLALDGATVVMTDARGAILHWSLG
CKQLYGFSEAEALGQNIYMLLRAQCPSWNSSYALPDADGAQELIEQRRDGSEVHVIERQL
RFATPSRGAVTVHSILDISERVAALRALRASEERLAQATAAHELGIFDWDLSGDHVNWSP
GTEQRLGLPPGSLSSFNQWRQLIDQNDLEQLRQTVAIAVAERAERFSFRYRLIHCEGAGR
TLEGSARCFYDPAGNLIRVVGAALDITERDEREAALRRREAQLRTVLETVPDAMIVLTGD
GVIVQFSAAAEELWGYRASEVVGRHFSVLIPTDELEPDEAVLQRFLDTGEGLVGEVLVGV
ALTADGRRFPAEMRAGAAKSDDHMLITVFIRDLSERIAADQRLSELNNEIAHVSRQSAMS
EMAADLAHELNQPLSATANFLAAARMLIERGEGGTRVTDLLRMGSEQTQRAGEIIRRLRA
FVARGEVEMRVESVERTIRDAVELVLVGTGHFNLRVSFHLDPGARFILADRIQVQQVLVN
LLRNAIQALKLVEPDDRQITITSERLPDQMIAISVTDSGPGLPAQVLETLFSRFSTTKGG
AGGMGIGLSISKRIIEGHGGTLSAENAPGGGASFRFTLPGVEEGEE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcgcatcttggccatcttcgcattggcatgctcggtcgttgtgcttggcggctgg
acgttcgacctgccgctgctgcaacggtttcttccccgcacctatccgatgtggccgatc
aatgcggtaggctatgcgagcctggccatcgggctcttgctgacccagaccgagcgcgat
agccttgcccgccccttctacggagtggccctcgccatcggcgctctgggcaccgcccag
ccactgatcggcgactggctcgatctgggaaccctgctctttcccggaaaggtcgccgca
accgggctggaaagtgcgggccggcccggcgtgaacgccattgtctatctgctgatgctg
ccgatcgccgccttcgccgcgcatggccgatcgcgcctgctgcgcgacgtggcgccgctg
atcgcgatggcgccgctggcgctggcgctcgcgtcggccaccgcgatgatgcttgcgtcg
cacgcttcgatcgtcaacgccgggctgcgtgcctccgtgcccggaacgatcatcgcgatg
gcgctcaccggcgcgatcctgctcggccccgggcccgcccgcgcagatgtccgccgcttc
gggcgcatcgagcgatcggatccgctgtcgatccagaccatcgtagcgggcgcgatcctg
ctgccgaccttgcccgcgaccttcgaactgctgctggagcgcacccatcagggcgcgccg
gcgcccgggcacctggtgctcgcgctgttcaacgtgctggcggtcgggctgatcgcctat
tgggcggtgcaccgggtcggcgtggagcagagcgcccgagccgaactgagccttgctctc
gacggcgcaacggtggtgatgaccgacgcgcgcggcgccattctccactggtcgctgggc
tgcaagcagctgtacgggttcagcgaggccgaggcgctcggacagaatatctacatgctg
ctgcgcgcccaatgccccagctggaacagcagctatgccctgcccgacgccgatggcgcg
caggaactgatcgagcagcgcagggacggaagcgaagtccatgtgatcgagcgccagttg
cgcttcgccacccccagccgcggggcggtgacggtgcacagcatcctcgacatttcggag
cgcgtcgcggcgctgcgcgcgctgcgggcaagcgaggagcgactcgcccaggcgaccgcc
gcccacgaactcggcattttcgactgggacctgagcggcgaccacgtcaactggtcgccc
ggtaccgagcaacgcctcggcctgccgccggggtcgctgtccagcttcaaccagtggcgc
cagctgatcgaccagaacgacctggaacagctgcgccagaccgttgctatcgcggttgcg
gagcgtgccgaacgcttctcgttccgctatcgcctgatccattgcgagggtgcggggcgc
acgctggaaggctcggcgcggtgcttctacgatccggcgggcaacctcatccgcgtcgtc
ggcgcggcgctggacatcaccgagcgcgacgagcgcgaggcggcgctgcggcggcgcgag
gcgcagctccgcacggtcctcgaaaccgtgcccgacgcgatgatcgtcctgaccggcgac
ggcgtgatcgtgcagttcagcgctgcggccgaagaactctggggctatcgcgcatcggaa
gtggttggcaggcacttctcggtgctgatccccaccgacgaactcgagcccgacgaggcc
gtgctgcaacggttcctcgataccggcgagggcctggtcggcgaagtgctggtgggcgtg
gcgctgaccgcggacgggcggcggttccctgcggaaatgcgtgcgggcgccgccaagagc
gacgatcacatgctgatcaccgtcttcatccgcgacctgtccgagcgcatcgccgccgac
cagcggctcagcgagctgaacaacgagatcgcccatgtctcccgccagagcgcgatgagc
gagatggccgcggacctcgcacacgagctcaaccagccgctcagcgccacggccaatttc
ctcgccgccgcccggatgctgatcgagcgcggcgaaggcggaacgcgggtcaccgacctg
ctccgcatgggatccgagcagacgcagcgcgccggcgagatcattcgccggctgcgcgcc
tttgttgcgcgcggcgaggtggaaatgcgggtggaatcggtcgagcgcacgatccgcgat
gcagtggagctggtgctggtcggcaccggccatttcaatctgcgcgtgtcgttccacctg
gaccccggcgcgcgcttcattctggccgatcgcattcaggtacaacaagttctggtgaac
ctgctgcgcaatgccattcaggcactaaagctcgtcgagcccgatgaccggcagataacg
atcacgtcggagaggctacccgaccagatgatcgcgatttccgttaccgatagtggcccc
ggcctgcccgcgcaggtcttggaaacattgttttcgcggttcagcacaacaaaaggaggt
gcaggcggaatggggattggactttcgatcagcaaacgcattatcgaaggccatgggggt
actctgagtgcggaaaatgccccggggggtggtgcatcgttccgtttcacgcttcccggt
gtcgaagaaggtgaagaataa
DBGET
integrated database retrieval system
