Sphingomonas sp. R1: OIM94_07590
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Entry
OIM94_07590 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_07590
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_07590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UYY78834
LinkDB
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Position
complement(1566936..1569107)
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AA seq
723 aa
AA seq
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MSRRVLLASCSLALLPVSAWADPDRVVLASDAPAQAKSDPAQAQQGANIIVSAPYRQSET
DVLSGTSVVTGEELTRSLRPTIGETLARQPGVSASSFGPSASRPILRGFQGERVRILTDG
IGSIDVSNTSADHAVIIDPLLAERVEVLRGPSALLFGSSAMGGVVNVIDSRIPRTVPEKG
YRLSSIATYGSAANERSVGGAGDVAVGSHLVLHADGAYSKSDDLKIGGYALTAAKRREAL
ASAALPADPAAEDPIDFAANAAVRNRLPNTAAKTWTAGAGAAIVTDTGTLGIAYSHYDSL
YGVPIRFATEAGQEQEAPRLSVVQNRIDLRAEADTGGGILQKLRLRAGYAAYRHFELEPD
GGVGTAFYNKGLEGRLELVQADRGVWKGASGVQYFARDFDVVGDEAFLPKNKTEQIGLFT
LQQLDMGALKAEAGLRYEFTDLSADPVQGDLRFFNGSRHFEALSGSVGASYGVSRDVRIG
LNLSHTERAPSAEELFANGAHAGTEAYELGNPGFRLEKSWGLEATLHAHGDGYSFDASAY
YNWFSNYISDAETDPAVCAAAAAPSGRTVDLPCFQFTQRDARYYGFEAEGSVRLAQLGGT
TINLDALGDYVRANIVDQGPAPRIPAPRVLGGIEAQSDRVTGRLEAEHVFVQNRTAAFET
RTAPYTMVNATLSLKPFPAMPGTTLTLSANNLFDVDARRASSYLKDYAPLAGRDLRATLR
FSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcgcgtactcctcgcctcctgctcgcttgctctgctgcccgtgtccgcctgg
gccgatcccgatcgagttgtcctggcgagcgacgcgccggcgcaggcgaagagcgatccg
gcgcaggcgcagcagggcgcgaacatcatcgtatcggccccctatcggcagagtgagact
gacgtgctctccggcacctccgtcgtcaccggcgaggaattgacccgcagcctccgcccg
accatcggcgagacgctggcccgccagccgggcgtgtccgccagctcgttcggcccgagc
gcgtcgcggccgatcctgcgcggcttccagggcgagcgcgtccgtatcctgaccgacggt
atcgggtccatcgatgtgtccaacacctcggccgatcatgcggtgatcatcgacccgctg
ctggccgagcgcgtcgaggtgcttcgcggaccgtcggcgctgctgttcggatcatcggca
atgggcggcgtcgtcaatgtgatcgacagccgcatcccacgcaccgtgccggagaagggc
tatcggctgagcagcatcgccacctatggctccgcggccaacgagcgttcggttggcggg
gcgggggacgtagcggtgggcagccacctggtcctgcatgcggatggcgcctattccaag
tcggacgacctcaagatcggcggctatgcgctgacggcggccaagcgtcgtgaagcgttg
gccagcgcggcgctcccggccgacccggctgcggaggatccgatcgacttcgccgccaac
gccgcagtgcgtaaccgcctgcccaacaccgccgccaagacctggacggccggggcgggg
gcggcgatcgtcaccgataccggcacgctcggtatcgcctatagccattatgacagcctc
tacggcgtgccgatccgctttgcgaccgaggcgggccaggagcaggaggcgccgcgactg
agcgtggtgcagaaccggatcgacctgcgcgccgaggccgataccggcggcggtatcctg
cagaagctgcgcctgcgcgccggctatgcggcgtatcgccatttcgaacttgagcccgat
ggcggcgtgggcacggccttctacaacaaggggctggagggccggctcgagctcgtccag
gccgatcgcggcgtctggaagggggcgagcggcgtgcagtatttcgcccgcgatttcgac
gtggtgggcgacgaagccttcctgcccaagaacaagaccgaacaaatcggcctgttcacg
ctgcagcagctcgacatgggcgcgctcaaggcggaggcggggctgcgctacgagttcacc
gatctgtccgccgatcccgtgcagggcgatctgcgcttcttcaacggatcgcggcatttc
gaggcgctgtcgggctcggtcggcgcttcctatggcgtgagccgtgacgtacggatcggt
ctgaacctctcgcatacggagcgtgccccctcggccgaggagctgttcgccaacggcgcc
catgccggcaccgaggcctatgagctaggcaacccgggcttccggctggagaagagctgg
ggcctggaagcgacgctgcacgcgcatggcgacgggtacagtttcgatgcctcggcctat
tacaactggttctccaattatatcagcgatgccgagaccgatcctgcggtctgcgccgcg
gctgccgcgccgagcgggcggacggtggacctgccctgcttccagttcacccagcgcgat
gcgcgctattatggcttcgaggccgagggctcggtccggctggcgcaactgggcggtacc
acgatcaatctcgatgccctgggcgattatgtccgcgccaacatcgtcgatcaggggccg
gcgccgcgcatccccgccccgcgcgtgctcggcgggatcgaggcgcagtcggaccgggtt
accggccggctggaggcggagcatgtgttcgtccagaaccgcactgccgcattcgagacg
cgtaccgcgccctacacgatggtcaacgcgacgctgagcctcaagccgttcccggccatg
ccgggcacgacgctgaccctgtcggcgaacaacctgttcgacgtcgatgcccgccgcgcc
agcagctatctgaaggattacgcgccgctcgcaggccgtgacctgcgcgcgacgctgcgt
ttcagcctgtag
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