Sphingomonas sp. R1: OIM94_08575
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Entry
OIM94_08575 CDS
T11062
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OIM94_08575
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sprr01007
]
OIM94_08575
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sprr03016
]
OIM94_08575
Enzymes [BR:
sprr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
OIM94_08575
Amino acid related enzymes [BR:
sprr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
OIM94_08575
Transfer RNA biogenesis [BR:
sprr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OIM94_08575
Prokaryotic type
OIM94_08575
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
ProRS-C_1
Motif
Other DBs
NCBI-ProteinID:
UYY79018
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Position
complement(1768866..1770398)
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AA seq
510 aa
AA seq
DB search
MIKHALSVTRDGDFAQWYQTVISEADMAEDSGVRGCMVIRPWGYGIWERIQRLLDDRIKA
TGHENCYFPLFIPLSYFEKEAEHVDGFAKEMAVVTHHRLVQKDGRLVPDPEAKLEEPLVV
RPTSETVIGAAMSRWVQSWRDLPVLINQWANVVRWEMRTRMFLRTAEFLWQEGHTAHATV
EEAQEETLKMLEVYRSFAEDCLAMPVIAGEKPENERFPGAVSTFSIEAMMQDGKALQAGT
SHFLGTTFSSAQDIKFQNSEGQFELAQTTSWGVSTRMIGGLIMVHGDDDGLRVPPMVAPW
QIVIVPMLRDQPEDAATIDYCKSLQAELAKLTALGEPVRALLDLKAVKAQTKRWGWVKKG
APIVIEVGGRDVAGGNVSVIQRDKLYREDGKLNSQILPRADFVAEAAAILESIQQSLYLD
ARGRLDSNIRRDVTDYDTLAAMFADSEKFPGWAEVSWAKPTGAELDAVVERLKALKLTFR
NVPGGAAPAEGTCLFTGKPAVERILVARAY
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcacgccctttccgtcacgcgcgacggcgatttcgcgcaatggtaccagacc
gtcatcagcgaagccgacatggccgaggattcgggcgtgcgcggctgcatggtcatccgg
ccctggggctatggtatctgggagcgcatccagcgcctgctcgacgatcgcatcaaggcg
acgggccacgagaactgctatttcccgctgttcatcccgctttcctatttcgagaaggaa
gccgagcatgtcgacggcttcgccaaggaaatggcggtcgtcacgcaccatcgccttgtc
cagaaggacggccggctggttcccgatcccgaggcgaagctggaagagcctttggtcgtc
cgccccacctcggagacggtgatcggcgcggcgatgtcgcgctgggtgcagagctggcgc
gacctgccggtgctgatcaaccagtgggcgaacgtcgtccgctgggaaatgcgcacccgc
atgttcctgcgcaccgccgaattcctgtggcaggaagggcatactgcccacgccaccgtc
gaggaggcgcaggaagagaccctcaagatgctcgaggtctatcgcagcttcgccgaggat
tgcctcgcgatgccggtgattgccggcgagaagccggaaaatgagcgcttcccgggcgcg
gtctcgaccttctcgatcgaggcgatgatgcaggacggcaaggcgctgcaggccggcacc
tcgcacttcctcggcaccaccttctcgtcggcgcaggacatcaagttccagaattcggaa
ggccagttcgaactggcgcagacgaccagctggggcgtctcgacccgcatgatcggcggg
ctgatcatggtccacggcgacgatgacggcctgcgcgtgccgccgatggtggcgccgtgg
cagatcgtgatcgtgccgatgctgcgcgaccagcccgaggacgcggcgacgatcgactat
tgcaagtcgctccaggccgaactcgccaagctgaccgcgctcggcgagccggtgcgcgcg
ctgctggacctgaaggcggtgaaggcgcagaccaagcgctggggctgggtgaagaagggc
gcgccgatcgtgatcgaggtgggcgggcgcgatgtggcgggcggcaatgtctcggtgatc
cagcgcgacaagctttaccgcgaggatggcaagctcaattcgcagatcctgccccgcgcc
gacttcgtcgccgaagctgccgcgatcctcgagagcatccagcagagcctgtacctcgac
gcgcgcggccggctggacagcaatatccgccgcgacgtgaccgattacgacacgctggcg
gcgatgttcgccgattcggagaagttcccgggctgggccgaggtcagctgggccaagccg
accggcgcagagctggacgcagtggtcgagcggctgaaggcgctgaagctcaccttccgc
aacgtgcccggcggcgcggcaccggcggaaggcacctgcctgttcaccggcaagccggcg
gtcgagcggatcctggtggcgcgcgcctattga
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