Sphingomonas sp. R1: OIM94_09350
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Entry
OIM94_09350 CDS
T11062
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00260
Glycine, serine and threonine metabolism
sprr00460
Cyanoamino acid metabolism
sprr00630
Glyoxylate and dicarboxylate metabolism
sprr00670
One carbon pool by folate
sprr00680
Methane metabolism
sprr01100
Metabolic pathways
sprr01110
Biosynthesis of secondary metabolites
sprr01120
Microbial metabolism in diverse environments
sprr01200
Carbon metabolism
sprr01230
Biosynthesis of amino acids
sprr01240
Biosynthesis of cofactors
sprr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OIM94_09350
09102 Energy metabolism
00680 Methane metabolism
OIM94_09350
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OIM94_09350
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
OIM94_09350
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OIM94_09350
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
OIM94_09350
Enzymes [BR:
sprr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
OIM94_09350
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
UYY79164
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Position
complement(1914092..1915399)
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AA seq
435 aa
AA seq
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MSTNPVTAGLQPDGFFTKSLADVDPAVFAGVEHELAREQYQIELIASENIVSKAVLEAQG
SVFTNKYAEGYPGKRYYQGCHPSDEVEQLAIDRAKQLFGCGFANVQPHSGAQANGAVMLA
LTKPGDTILGLSLDAGGHLTHGARAAMSGKWFNAVQYGVRPDDHLIDYDQVLALAKEHSP
KLIITGGSAYPRQIDFARFRAIADEVGATFMVDMAHFAGLVAGGVHPTPFGHAHVVTTTT
HKTLRGPRGGMIMTNDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKSYAA
AVVENAKVLAATLKERGANLVSGGTDTHLALVDLTPLGVTGKDADEALERAAITCNKNGI
PNDPLPPMKTSGIRVGSPAGTTRGFGPAEFREIGNMVADVLEGLRTKGEAGDAAVEADVK
ARVRTLCERFPIYGG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaatcccgtaacggcaggccttcagccggatggcttcttcaccaaatcgctc
gccgacgtcgatccggcggtgttcgccggcgtcgagcatgagcttgcccgcgaacagtat
cagatcgagctgatcgcctccgagaacatcgtctccaaggcggtgcttgaggcgcagggc
tcggtcttcaccaacaagtatgccgagggctatcccggcaagcgctattaccagggctgc
cacccgtccgacgaggtggagcagctggcgatcgatcgcgccaagcagctgttcggctgc
ggcttcgccaacgtccagccgcattcgggcgcgcaggcgaacggcgcggtgatgctcgcg
ctgaccaagccgggcgacaccatcctcggcctcagcctcgatgccggcggccacctgacg
cacggcgcccgcgcggcgatgagcggcaagtggttcaacgcggtgcagtacggcgtgcgc
cccgacgatcacctgatcgactatgaccaggtgctggcgctcgccaaggagcatagcccc
aagctgatcattaccggcggctcggcctatccgcgccagatcgatttcgcccgcttccgc
gcgatcgcggacgaggtcggcgcgacgttcatggtcgacatggcccactttgccggcctg
gtcgccggcggcgtccaccccacgccgttcggccacgcccatgtcgtcaccaccaccacg
cacaagacgctgcgtgggccccgtggcggcatgatcatgaccaacgacgaagcgatcgcc
aagaagatcaattcggcggtgttcccggggctccagggcggcccgctgatgcacgtgatc
gccgccaaggcggtcgcgttcggcgaggcgctgcgccccgagttcaagagctatgccgcg
gcggtggtcgagaacgccaaggtgctggcggcgacgctcaaggagcgcggtgcgaacctc
gtctcgggcggcaccgacacccacctggcgctggtcgatctcaccccgctgggcgtgacc
ggcaaggacgccgacgaggcgctggagcgcgccgcgatcacctgcaacaagaacggcatc
cccaacgatccgctgccgccgatgaagaccagcggcatccgcgtcggctcgccggcgggc
accacccgcggcttcggcccggccgagttccgcgagatcggcaacatggtcgccgacgtg
ctcgaaggccttcgcacgaagggcgaggcgggcgacgccgcggtcgaggccgatgtgaag
gcccgcgtccgcacgctgtgcgaacgcttcccgatctacggcggctaa
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