Sphingomonas sp. R1: OIM94_10695
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Entry
OIM94_10695 CDS
T11062
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sprr03110
]
OIM94_10695 (clpB)
Chaperones and folding catalysts [BR:
sprr03110
]
Heat shock proteins
HSP100
OIM94_10695 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
nSTAND3
Sigma54_activat
IstB_IS21
AAA_18
AAA_7
Mg_chelatase
TniB
bpMoxR
AAA_24
NACHT
AAA_25
NBD_SMAX1
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
UYY76001
LinkDB
All DBs
Position
2206289..2208868
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AA seq
859 aa
AA seq
DB search
MNLEKFTDRAKGFLQSAQTVAIRMNHQRISPEHLLKALLEDEQGMASGLIQAAGGDAKRA
LSETDLALSKIPAVSGSGAQSTPGLDNDLVRVLDQAETIAQKSGDSYVTVERLLVALALS
LNTAAGKALQAASAKPEALNTAINAMRGGRTADTSSAEDRYDALKKFARDLTEAARAGKL
DPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGLALRIANGDVPDTLKDRTL
MALDMGSLIAGAKYRGEFEERLKGVLDEVKGAEGQIVLFIDEMHTLIGAGKAEGAMDAGN
LLKPALARGELHCIGATTLDEYQKHVEKDPALQRRFQPVFVGEPTVEDTISILRGLKEKY
ELHHGVRITDAAIVAAATLSNRYIADRFLPDKAIDLMDEAASRIRMEVESKPEEIETLDR
RIIQLKIEREALKRETDAASRDRLATLEEDLANLEQQSAELTTRWQAEKDKINAEAVLKG
QLDQARLELEQAQRGGDLARAGELSYGVIPQLTRQLDEAQSAAKGAMLREEVTADDIAGV
VARWTGIPMERMLEGEREKLLHMEEQLGKRVIGQADAVKAVSTAVRRSRAGLQDPNRPLG
SFLFLGPTGVGKTELTKALAEFLFDDPNAMVRIDMSEFMEKHAVARLIGAPPGYVGYEEG
GVLTEAVRRRPYQVVLFDEVEKAHNDVFNILLQVLDDGRLTDGQGRTVDFSNTIVILTSN
LGSQYLTNLADGHGVEEVEPQVMEVVRAHFRPEFLNRLDEIILFHRLGADHMAPIVDIQV
GRVAKLLKDRKVGITLTPAAREWLGRVGYDPVYGARPLKRAVQRYLQDPLADLILRGAVK
DGSTVQVDEGDGALALRVE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgagaaattcaccgaccgcgccaagggcttcctgcaatcggcgcagaccgtg
gcgatccgcatgaaccatcagcggatcagcccggaacatcttctgaaggcactgctcgag
gacgagcagggcatggccagcggcctgatccaggcggccggaggcgacgccaagcgcgca
ttgagcgagaccgatctggcactgtcgaagatcccggccgtcagcggctcgggcgcgcag
tcgacgccggggctcgacaatgatctcgtccgcgtgctcgatcaggccgagacaatcgcg
cagaaatccggcgacagctatgtcacggtcgaaaggctgctggtcgcgctggcgctaagc
ctcaacaccgccgccggcaaggcgctgcaggccgcgagcgcgaagcccgaggcgctcaac
accgcgatcaacgcgatgcgcggcggccgtactgccgacacgtcctccgccgaggatcgc
tacgacgcgctcaagaagttcgcccgcgacctgacggaggcggcacgcgccggcaagctc
gatcccgtgatcggccgcgacgaggagatccgccgcaccatccagatcctcgcccgccgc
accaagaacaatccggtgctgatcggcgagcccggcgtcggcaagaccgcgattgccgag
ggcctggcgctgcgcatcgccaatggcgacgtgcccgatacgctgaaggaccgcacgctg
atggcgctcgacatgggcagcctgatcgcgggtgccaaatatcgcggcgagttcgaggag
cgcctcaagggcgtgctcgacgaggtgaagggcgccgagggccagatcgtgctgttcatc
gacgagatgcacacgctgatcggcgccggcaaggccgagggcgcgatggacgccggcaac
ctgctcaagcccgcgctcgcccgaggcgaactgcactgcatcggcgcgaccacgctcgac
gagtatcagaagcatgtcgaaaaggaccccgcgctccagcggcggttccagccggtgttc
gtcggcgaacccacggtcgaggacacgatctcgatcctgcgcgggctcaaggagaagtac
gagctgcaccacggcgtgcggatcaccgacgcggcgatcgtcgcggcggcaacgctttcc
aaccgctacatcgccgaccgcttcctgcccgacaaggcgatcgacctgatggacgaggcc
gccagccgcatccgcatggaagtggaatcgaagcccgaggagatcgaaacgctcgaccgg
cggatcatccagctcaagatcgagcgcgaggcgctgaagcgcgagaccgacgcggcctcg
cgcgaccggctcgccacgctggaggaagacctcgccaatctcgagcagcaatcggccgag
ctgaccactcgctggcaggcggagaaggacaagatcaacgccgaggcggtgctcaagggc
cagctcgaccaggcgcggctggagctggagcaggcgcagcgtggcggtgacctcgcgcgc
gctggcgagctctcctacggcgtgatcccgcagctcacccgccagcttgacgaggcgcag
agcgcggccaagggcgcgatgctgcgcgaggaagtcaccgccgacgatatcgccggggtg
gtcgcgcgctggaccggcatcccgatggagcggatgctggagggcgagcgcgagaagctg
ctgcacatggaggagcagctgggcaagcgggtgatcggccaggccgatgcggtgaaggcg
gtctccaccgccgtgcgccgcagccgcgcggggctgcaggatccgaaccggcctttgggc
tcgttcctgttcctcggccccacgggcgtgggcaagaccgagctgaccaaggcgctcgcc
gagtttctgttcgacgatcccaatgcgatggtgcgcatcgacatgagcgagttcatggag
aagcacgcggtcgcgcggctgatcggcgccccgccgggctatgtggggtacgaggaaggc
ggcgtgctcaccgaggcggtgcggcggcggccctatcaggtggtgctgttcgacgaggtg
gagaaggcgcacaacgacgtgttcaacatcctcctccaggtgctcgacgacggtcgcctg
accgatggccagggccgtacggtggatttctcgaacacgatcgtgatcctcacctcgaac
ctgggcagccagtatctcaccaacctggccgacgggcacggggtggaagaggtcgagccg
caggtgatggaggtggtgcgggcgcatttccggcccgaattcctcaaccggctggacgag
atcatcctgttccaccggctgggcgcggatcacatggcgccgatcgtcgacatccaggtc
ggtcgcgtggcgaagctgctcaaggaccgcaaggtgggcatcacgctcacgcccgcggcg
cgcgaatggctgggccgggtcggctatgatccggtctacggtgcgcggccgctcaagcgc
gcggtccagcgctacctgcaggacccgctcgcggacctgatcctgcgcggggcggtgaag
gacgggtccaccgtgcaggtcgacgagggcgatggcgcgctggcgttgcgggtggagtga
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