Sphingomonas sp. R1: OIM94_11150
Help
Entry
OIM94_11150 CDS
T11062
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprr03400
]
OIM94_11150
DNA repair and recombination proteins [BR:
sprr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
OIM94_11150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
ResIII
FtsK_SpoIIIE
AAA_10
AAA_22
Zeta_toxin
SLFN-g3_helicase
Hydrolase
AAA_7
T2SSE
CbiA
AAA_19
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UYY76087
LinkDB
All DBs
Position
2321927..2323525
Genome browser
AA seq
532 aa
AA seq
DB search
MAEETGLFVGAAGDARIALNLRRANRHGLIAGATGTGKTVTLQGLAEGFSAAGVPVFVAD
VKGDLGGLGMAGSPLAKPHAAFAARAQAIGDSDWKYQAMPVQLWDLFGEQGHPIRATVSE
MGPLLLARLMDLNEVQEGVLTIAFHVADAEGLLLLDLDDLQAMLAHCAERAEELSTTYGN
VSKQSVGAIQRQLLQLRTQGGTHFFGEPALSIQDFLAHDDSGRGVINILAADKLMASPRL
YASFLLWLLSELFETLPEIGDPDKPVLVFFFDEAHLLFDDAPKALLEKIEQVVRLIRSKG
VGVYFVTQNPIDIPEDVAAQLGNRIQHALRAFTPRDQKAIRAAAETFRASPGLDVATAIT
ELAVGEALVSLLQADGSPAPVARTLIRPPASRVGPLAADERKVLVETDAIGAKYDVAIDR
ESAEELIAAKRAEASAAAAEAQAQDAAAKAAAAQAKEDARRAKEEERARIAAEREAANNP
LNRAIRSATRSASSAAGRAVANEVSKAVFGSKGGGGMLGQVVRGVLGGLFRG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagacgggccttttcgtgggtgcagccggggacgcgcggatcgcgctcaac
ttgcgccgcgccaatcggcacgggttgatcgcgggcgcgaccggcaccggcaagacggtg
acgctgcagggactggcagagggcttttcggctgcgggcgtgccggtgttcgtggccgac
gtgaagggcgatctgggcggcctcggcatggccggatcgccgctcgccaaaccgcatgcg
gccttcgccgcccgggcgcaggccatcggcgacagcgactggaagtatcaggcgatgccg
gtccagctctgggaccttttcggcgaacagggccatccgatccgcgccacggtttccgaa
atggggccgctgctgctcgcccggctgatggacctgaacgaggtgcaagagggcgtgctg
accatcgccttccacgtcgccgatgccgaagggctgctgctgctcgacctggatgatctc
caggcgatgctggcccactgcgccgagcgggccgaggaactgagcaccacctacgggaat
gtctcgaagcagagcgtcggcgcgatccagcgccagctgcttcagctgcgcacccagggc
ggcacccatttcttcggcgagcccgcgctcagcatccaggacttcctcgcgcacgacgac
agcggccgcggcgtgatcaacatcctcgccgccgacaagctgatggcgagcccgcgcctc
tatgccagcttcctgctctggctgctgtccgagctgttcgagacgcttcccgagatcggc
gatcccgacaagccggttctcgtcttcttcttcgacgaggcgcatctgctgttcgacgat
gcccccaaggcgctgctcgagaagatcgagcaggtggtgcggctgatccggtccaagggc
gtcggcgtgtatttcgtgacgcaaaacccgatcgacattcccgaggacgtggcggcgcag
cttggtaaccgcatccagcacgcgctgcgcgccttcacgcctcgcgaccagaaggcaatc
cgtgctgccgccgagaccttccgcgccagccccggcctcgacgtggcgaccgccattacc
gagctggcagtgggcgaggccctggtgtcgctgctgcaggcggatggatcgccggctccg
gtcgcacggacgctcatccgcccgcccgcctcgcgcgtgggtccgctggcggcagacgag
cgcaaggtgctggtcgagaccgatgcgatcggcgccaaatacgacgtcgcgattgatcgc
gagtcggccgaggaactgatcgccgcgaagcgcgccgaggccagcgctgccgccgcagaa
gcccaggcccaggacgccgccgccaaggccgccgccgcccaggcgaaggaagatgcccgc
cgcgccaaggaagaggaacgcgcccgcattgccgccgagcgcgaggcggcgaacaacccg
ctcaaccgcgccattcgctccgccacgcgctcggcctcctcggcggcgggtcgcgcggtc
gcgaacgaagtcagcaaggcggtgtttggcagcaagggcggcggcgggatgctcggccag
gtcgtgcgcggcgtactcggggggctgttccgcggctga
DBGET
integrated database retrieval system
