Sphingomonas sp. R1: OIM94_12120
Help
Entry
OIM94_12120 CDS
T11062
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00550
Peptidoglycan biosynthesis
sprr01100
Metabolic pathways
sprr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OIM94_12120
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OIM94_12120
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sprr01003
]
OIM94_12120
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sprr01011
]
OIM94_12120
Enzymes [BR:
sprr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
OIM94_12120
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OIM94_12120
Glycosyltransferases [BR:
sprr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
OIM94_12120
Peptidoglycan biosynthesis and degradation proteins [BR:
sprr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
OIM94_12120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Arteri_env
Motif
Other DBs
NCBI-ProteinID:
UYY76265
LinkDB
All DBs
Position
2531464..2533611
Genome browser
AA seq
715 aa
AA seq
DB search
MAVKSKTAAAPWWRRGSFWKKFFLWSFISGVGVALIAFIALVIAVYSAHSTLPSFDEMKS
SPNGQMIRVHAVDGTVLVSLGPSYGEWIQYDQIPQAMKDAIIATEDRRFESHWGVDPIGV
ARIFWVAKRLHDEGRRLQGGSTITQQVARTIFLSNKYSVGRKIREAILALALERKFSKRQ
ILELYLNKVYFGGGAYGIDAASRKFFGHPATSLSLGESAIVAGLVKAPSHYSPTADSEAA
VDRATVVLKLMADAGKISEAQASATDPHAVQLAPEPKQNSVRYFTDWALPQLETLIDETD
APLDVWTTLDLNMQRSADAAIRANAPDGAQGALVSIERDGAVRAMVGGKDYVSSIYNRAT
QAQRQPGSSFKLFVYLAALEAGHKPDDVVVDEPVTIDGWSPRNDSRRNSGPISIRTAFAY
SVNTIAAKLGQEVGFTTVADMAKRFGITTAINTQPAMVLGTSNVRLIDMTRAFASVGNNG
VAVTPYGITRVTANGKVIYQHEVDTSHVLVANYVAAQMIDLMQTAVATGTGRAAQIGRPV
AGKTGTTTSNKDGWFIGFSSGLTTGVWMGRDDAKVVPGLQGGRAPARAFHDFMIQAVANR
PVEQFETQLTPPDNMLEPDEDAYGAPDNGMMVDQDGNPIAPPPQVPVDPQDGDDVDGTAP
AQQGGRPAPVQPQQGEKLDRDWINRMTGRPPAQQQPGRPPQRQPAPQGQRPNDEY
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgaaatcgaaaaccgcagctgcgccctggtggcgccggggctccttctggaag
aagttcttcctctggtcgtttatcagcggcgtgggggtggcactgatcgccttcatcgcg
ctggtgatcgcggtctattcggcgcattccacgctgcccagcttcgacgagatgaaatcc
tcgcccaacggccagatgatccgggttcacgcggtggacggcacggtgctggtctcgctc
gggccgagctatggcgagtggatccagtacgaccagatcccccaggcgatgaaggacgcg
atcatcgcgacggaggatcgccggttcgaatcccattggggcgtcgatccgatcggcgtg
gcgcgcatcttctgggtcgccaagcggctgcatgacgagggccgccgcctgcagggcggc
tcgaccatcacccagcaggtggcccgcaccatcttcctgtcgaacaagtacagcgtcggt
cgcaagatccgcgaagccatcctggcgctggcgctggaacgcaagttcagcaagcggcag
atcctcgagctgtatctgaacaaggtctatttcggtggcggcgcctatggcatcgacgct
gccagtcgcaagttcttcggccatcctgcgaccagcctttcgctcggcgagtccgcgatc
gtcgccgggctggtcaaggcgccctcgcattattcgccgaccgccgattccgaggctgcg
gttgatcgcgcgacggtcgtgctgaagctgatggccgatgccggcaagatcagcgaggcg
caggccagcgcaaccgatccgcacgccgtgcagctggcgccggagcccaagcagaacagc
gtccgctacttcaccgactgggcattgccgcagctggagacgctgatcgacgagacggac
gccccgctcgacgtgtggacgacgctggacctcaacatgcagcgcagcgccgatgcggcg
atccgcgccaatgcgccggacggggcgcagggcgcgctcgtctcgatcgagcgggacggc
gcggtgcgcgcgatggtcggcggcaaggactatgtgtcctcgatctacaaccgcgcgacg
caggcccagcgccagccgggctcctcgttcaagctgttcgtctatctcgcggcgctggaa
gccgggcacaaacccgacgacgtcgtggtcgacgagccggtgacgatcgacggctggagc
ccgcgcaacgattcgcggcgcaacagcgggccgatctcgatccgcaccgccttcgcctat
tcagtcaacacgatcgcggcgaagctgggccaggaggtgggcttcaccaccgtagcggac
atggccaagcgcttcgggatcaccacggcgatcaacacgcagccggcgatggtactcggt
acctccaacgtgcgcctgatcgacatgacccgcgccttcgcctcggtgggcaataacggc
gtggcggtgacgccctatggcatcactcgcgtgaccgccaacggcaaggtgatctaccag
catgaggtggatacgagccatgtgctcgtcgccaactatgtcgcggcgcagatgatcgat
ctgatgcagaccgccgttgccaccggcaccggtcgcgccgcgcagatcggccgcccggtg
gcgggcaagaccggtacgaccacctccaacaaggatgggtggttcatcggcttctccagc
ggcctcaccaccggcgtgtggatgggccgcgacgatgccaaggtcgtgcccggcctgcag
ggcggccgtgcgcccgcgcgcgccttccacgacttcatgatccaggccgtcgcaaaccgt
ccggtcgagcagttcgagacgcagctgacgccgcccgacaacatgctggagccggacgag
gacgcctatggggcccccgacaacggcatgatggtcgatcaggacggcaacccgatcgcc
ccgccgccgcaggtgccggtggatccgcaggatggcgacgatgtcgatgggaccgcaccc
gcgcagcagggcggtcgcccggcgccggtccagccgcagcagggcgagaagctcgatcgc
gactggatcaaccggatgaccggccgtccaccggcgcagcagcagccgggccgcccgccg
cagcgccagcctgcaccccagggacagcgccccaacgacgaatattga
DBGET
integrated database retrieval system
