Sphingomonas sp. R1: OIM94_12235
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Entry
OIM94_12235 CDS
T11062
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sprr03016
]
OIM94_12235 (mnmE)
Transfer RNA biogenesis [BR:
sprr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
OIM94_12235 (mnmE)
Prokaryotic type
Methyltransferases
OIM94_12235 (mnmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
AAA_16
AAA_28
Dynamin_N
ABC_tran
RsgA_GTPase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UYY76286
LinkDB
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Position
2548489..2549772
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AA seq
427 aa
AA seq
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MDTIFAVSSGAPPAAIAVLRISGARAFAAVQQLAGDVPVARHAALRTLRDTHGEPLDQAL
VLVFPGPRSATGEDLAELHLHGGRAVVRAVEAALGAMEGLRAAEAGEFTRRALLNGRLDL
TAAEGLGDLLMAETEAQRRAAVRTAGGAVRRHAEDWTARLVGIAARIEAELDHGDEDDVA
GVDPLPALRCAAAALGHDIAAVASRPPVERLRDGLRVVLGGPPNAGKSTLFNALAERDAA
IVSPIAGTTRDRIEVPVVREGVAWLLVDTAGLAEAMDDPIEAIGVARARDALDEADLLLW
LGDDAPPAHPSALWVHARADAADRPEAHRAQIVVSVHEGRGVDALWQRMAIAAAALLPPP
DLVALNARQREWCLVAVEALGRAAALEDPLLFAEELRAGRRALDAITGRAAVEDVLDALF
GKFCIGK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatctttgcggtttccagcggcgcgccgcccgcggcgattgccgtcttgcgg
atcagcggtgcccgcgcctttgctgcggtgcagcagctggcaggtgatgttcctgttgca
aggcatgctgcgctgcgaaccttgcgggacacgcatggggagccgctcgaccaggctctg
gttctggtctttccgggtccgcgatcggcaaccggcgaggatcttgccgagctccatctg
catggcggcagggcggtggtacgggcggtggaggcggcgcttggcgccatggaggggctc
cgcgctgcggaggcaggagaattcacccggcgggcgctgctcaacggcaggctggatctg
acggcggcggagggcctcggcgatctgctgatggcagaaaccgaggcgcagcgtcgtgcg
gcggtccggactgcaggcggtgcggtacgccgccatgccgaagattggactgcccgtctg
gtcggtatcgccgcgcgcatcgaggccgagcttgatcatggcgacgaggatgatgtcgcc
ggcgtcgatccgctgccggccctgcggtgcgccgcggccgcgctcgggcacgacattgcc
gccgtcgcatcacggccgccggtggaacggttgcgggacgggcttcgtgtcgtgctgggt
ggtcctcccaatgccggcaagtcgacactgttcaatgcgctggccgaacgcgacgcggct
atcgtgtcgcccatcgccggtacgacgcgcgaccggatcgaggtgccggtggtgcgtgag
ggcgtcgcatggctattggtcgatacggcagggcttgccgaggcgatggacgatccgatc
gaggcgatcggcgtcgcgcgcgcgcgcgacgccctcgacgaggcggaccttctgctgtgg
ctgggcgatgatgctccgcccgcgcatcccagtgcgctgtgggtgcatgcgcgtgccgac
gcggcggatcgccccgaggcgcaccgcgcgcagatcgtcgtctcggtgcatgagggcaga
ggcgtggatgcgctgtggcagcgcatggcgatcgctgccgcggcgttgttgccgccgccg
gacctcgtcgcgctcaacgcgcgccagcgggaatggtgcctcgtggctgtcgaggcgttg
ggacgcgcagctgcgctcgaggatcctttgctgttcgccgaggaactccgcgcggggcgg
cgggcgcttgatgccattacgggcagggcggcggtggaagatgtgctggatgcgctcttc
ggaaaattctgtataggtaaataa
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