Sphingomonas sp. R1: OIM94_12795
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Entry
OIM94_12795 CDS
T11062
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00730
Thiamine metabolism
sprr01100
Metabolic pathways
sprr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
OIM94_12795 (thiC)
Enzymes [BR:
sprr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
OIM94_12795 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UYY76395
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Position
2670356..2672227
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AA seq
623 aa
AA seq
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MADIPAKTEIGVTTGPIRGSRKIHVGKHRVAMREIHLEPGSGEAPVRVYDTSGPYTDPDA
RIDIMAGLPALRRDWILARGDVEAYDARQVKPEDNGLKGPDRSAGVPQFPNVVKRPLRAK
PGMNVSQMHYAKRGIITPEMEYVAERENLGRERLAEYVRDGQDWGAAIPDYVTPEFVRDE
VARGRAIIPNNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKMVWSIRWGADT
VMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLIEQAEQG
VDYFTIHAGVRLPYIPMTAKRVTGIVSRGGSIMAKWCLAHHRESFLYERFDEITEIMKAY
DIAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAWEQDVQVMIEGPGHVPMHKIKQN
MEKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLPD
RDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSRARFEFRWRDQFNLSLDPDTAEQYH
DQTLPAEGAKTAHFCSMCGPKFCSMKITQEVRDFAAKQNASADTFLAATPATVDAETGMA
EMSKVFRETGSELYMGAGGREHD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggccgacattcccgccaagaccgaaatcggcgttactaccggcccgatccgcggcagc
cgcaagatccatgtcggcaagcaccgcgtcgcgatgcgcgagatacatctcgagccgggc
agcggcgaggcgccggtgcgcgtctacgacacctcgggcccctacaccgatcccgacgcg
cgcatcgacatcatggccggcctgccggcgctccgtcgcgactggatcctcgcccgcggc
gatgtcgaggcctatgacgcgcgccaggtgaagcccgaggacaacggcctgaagggcccg
gaccgctcggccggcgtgccgcagttccccaacgtcgtgaagcgccccttgcgcgccaag
ccgggcatgaacgtgtcccagatgcactatgccaagcgcggcatcatcacgcccgaaatg
gaatatgttgccgagcgcgagaatctcggccgcgagcggctggccgaatatgtccgcgac
gggcaggactggggcgccgcgatccccgactatgtgacccccgaattcgtccgcgacgaa
gtggcgcgtggccgggcgatcatcccgaacaacatcaaccacccggaaagcgagccgatg
gcgatcggtcgcaacttcctggtcaagatcaacgccaatatcggcaactcggcggtcgcc
agcgacgtggcgtccgaggttgacaagatggtctggtcgatccgctggggcgcggacacg
gtgatggacctctccaccggccgcaacatccacgacacccgcgaatggatcctgcgcaac
tcgccggtgccgatcggcaccgtgccgatctaccaggcgctggagaaggtcggcggcatc
gccgaggacctcacctgggaaatcttccgcgacacgctgatcgagcaggccgagcagggc
gtcgactatttcaccatccatgccggcgtccggctgccgtacatcccgatgaccgccaag
cgcgtcaccggcatcgtcagccgcggcggctcgatcatggccaaatggtgcctcgcgcat
caccgcgaatccttcctctacgagcggttcgacgagatcaccgagatcatgaaggcctat
gacatcgcctattcgctgggcgatggtctccgccccggctcgatcgccgacgccaatgac
gaggcgcagttcgccgagctctacacgctgggcgaactgaccaagcgcgcctgggaacag
gacgtgcaggtgatgatcgagggccccggccatgtgccgatgcacaagatcaagcagaac
atggaaaagcagctcgaggcgtgcggcgaggcgcccttctacacgctcgggccgctgacc
accgacatcgcgccgggctatgaccacatcaccagcggtatcggcgccgcgatgatcggc
tggtacggcacggcgatgctctgctacgtcacgcccaaggagcatctgggcctgcccgac
cgcgacgacgtgaaggtcggcgtggtcacctacaagctggcggcgcacgcagccgacctc
gccaagggccatccggcggccaaggtgcgcgacgacgcgctgagccgcgcgcgattcgag
ttccgctggcgcgaccagttcaacctgtcgctcgaccccgacaccgccgagcagtatcac
gaccagacactgccggccgagggcgccaagaccgcgcatttctgctcgatgtgcgggccg
aaattctgctcgatgaagatcacgcaggaggtgcgcgacttcgccgcgaagcagaacgcc
tcggccgataccttcctggcggcgacgccggcgacggtggatgccgagacgggcatggcc
gagatgagcaaggtgttccgcgagaccggcagcgagctctacatgggcgccggcggccgc
gagcacgattga
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