Sphingomonas sp. R1: OIM94_12910
Help
Entry
OIM94_12910 CDS
T11062
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K10107
capsular polysaccharide transport system permease protein
Organism
sprr Sphingomonas sp. R1
Pathway
sprr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OIM94_12910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_12910
Transporters [BR:
sprr02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Capsular polysaccharide transporter
OIM94_12910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuf2_DHR10-like
mRNA_G-N7_MeTrfase
Motif
Other DBs
NCBI-ProteinID:
UYY76418
LinkDB
All DBs
Position
2695935..2697101
Genome browser
AA seq
388 aa
AA seq
DB search
MKHGIILPAEEGLGASSESLWTKIGAFLRAWRNFALIVLLPTIAFAGYQYLVAADRYEST
SDFLVKSGDSSGSSSGGFGDMLGITVRSQSQVEIMSVPDYLESHEVLDALQKQIDLVALF
RRPEADFFSRLRYPAPEPERLLKYYRSRVQVKHDSDTGMMHLSVQAFRPEDSYKLAQLLL
QLGERKINDMNVRSYRDAVDSARSQLRRAEDEAASVQRKITGFRQVSQDIDPALSGQAQI
KLISDINGRLASARAQLNAMLGVIRSDSPQVEALRRQIRSMERELVSQEGKMGASGGPMS
MNLGEYEELKVRQDFAAKNYAAAAANLQRAIEQARKQQLYFVHVVDPNLPVRSLYPKRET
LVLTLFFSLAVAYAIGWLVVAGVREHEA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatggcatcatcctgccggctgaggaagggcttggagcgtcctctgaatcgctg
tggacaaagatcggggcgttcttgagggcgtggagaaatttcgcgctgattgttctgctg
cctaccattgcttttgctggataccaatatctagtcgcggcggatcgctatgaaagtacc
agtgacttcctagtgaagtccggggattccagtggatcgtcttccggcgggtttggcgac
atgctcggtattaccgttcggtcccagtcacaggtcgagatcatgagtgtcccggactat
ctggaatcgcatgaggttctcgacgcgttgcaaaagcagatcgatctggtggcattgttc
cgtcgcccggaggctgacttcttcagtcgtctgcgctatcccgcgcccgagcccgaacgg
ctactcaaatactatcgctcgcgcgtgcaggtgaagcacgactccgacacggggatgatg
catctgtcggtccaagccttccgcccggaagactcttacaagctagcgcagctgttgctc
cagttgggagagcgcaagatcaatgacatgaatgtgcgcagctatcgcgacgcagtggat
tcggctcggtcgcagctgcgccgtgccgaggatgaagcggcgagcgtgcagcgcaagatt
accggctttcgtcaggtcagccaggacatcgaccccgccttgtccggtcaggcgcagatc
aagctcatttccgatatcaatgggcgtctcgccagcgcacgagcgcagctcaacgcgatg
ttgggcgtcatccgatcggacagtccgcaagtggaagcgctgcgacggcagatccgctcg
atggagcgggagcttgtaagccaggagggcaaaatgggcgcctccggtggaccgatgtcg
atgaatcttggtgagtatgaggagctgaaggtccgccaagacttcgctgcgaaaaactac
gcggcagcggctgcgaatctgcagcgcgccatcgagcaggctcgaaagcagcaactgtac
ttcgtgcatgtcgttgacccgaacctcccggttcgttcgctgtatccgaagcgggaaacg
ctggtgctgacgctgttcttctcgctggcagttgcatacgccattggctggctggttgtc
gcaggcgttcgtgagcacgaagcgtga
DBGET
integrated database retrieval system
