Sphingomonas sp. R1: OIM94_13315
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Entry
OIM94_13315 CDS
T11062
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00550
Peptidoglycan biosynthesis
sprr01100
Metabolic pathways
sprr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OIM94_13315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OIM94_13315
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sprr01003
]
OIM94_13315
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sprr01011
]
OIM94_13315
Enzymes [BR:
sprr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
OIM94_13315
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OIM94_13315
Glycosyltransferases [BR:
sprr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
OIM94_13315
Peptidoglycan biosynthesis and degradation proteins [BR:
sprr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
OIM94_13315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UYY76493
LinkDB
All DBs
Position
2782490..2784994
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AA seq
834 aa
AA seq
DB search
MADGVPSDTPQRSERVPGRWARLRRRWWFRTLAVLALLAGLLVLGLWLLVARDLPSVNKL
RSYEPQLPSYVRSAEGTPIHAYAQMRRVQLSYNEFPPLLVRAFMAAEDRTFFSHHGLDFP
GLVRAAGEGLIRGKTPRGTSTITQQVAKNLGVGNEASYTRKLKEAILAWRIEDTLSKQQI
MELYLNFIELGRNSGGVAAASDAYFGKPLDKLSLAQMAYLAILPKGPANYDPDRNTQRAL
DRRNWVLGEMLRNGFINRAQHDEAVASPLGTVPRQTPRFERVGGYFVEEVRRQLARTFGE
NPDDGPYSVYGGGLWVRSSLDPKIQAYAQRALRDGLLRFDRGRGWSGPIGKAPFEGDGWY
SAFVSKNIGVDYDNWRAAVVIARDSRSAQLGFDDGDTGTMSASAAAMPIRGRGGHAFDAI
KVGDILAVAPEGGQWGLRSVPRISGGMVVEDPATGRVLAMQGGFDSRLQAFNRATQATRQ
PGSTIKPIVYAAALENGMTPASIVVDGPFCVWQGAGLGQKCFRNFGNARGAGPHTLRWGI
EQSRNLMTVQIANATGMDKVVDVIQRLGVSKNRLPPYLSYALGAGETTVLRMVNAYSILV
NQGRALNPTLIDFVQDRRGRVIFPAGWRACSGCNARDWDGKSMPRPIVRARQLIDPMVAY
QMVHITEGVIQRGTATVLRDLGRPMMGKTGTTTGPTDVWFVGGTPQMIGGLYLGYDTPSN
LGGYAQGGVIAAPIFKEFAIPAYAGLEPLPFVAPPGVRMVRIDRGSGRPVQGGWPSDDPL
SSIIWEAFRPDTDPRRTRRTANEEAPVAAATAPVQRKTDKQTDSDFLQRQGGIY
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcgtcccttccgatactccccagcgtagcgaacgcgtacccggccgctgg
gcgcggttgcggcgacgctggtggttccgcacccttgccgtgctggcgctgctcgccgga
ctgctggtgcttggcctttggctgctcgtcgcgcgcgacctgccctcggtcaacaaactg
cgcagctacgagccgcaattgcccagctatgtccgctctgccgagggcacgccgatccac
gcctatgcccagatgcggcgcgtgcagctgagctacaacgagttcccgccgctgctggtg
cgcgctttcatggccgccgaggaccgcaccttcttctcgcaccacggcctcgactttccg
ggcctggtacgcgcggcgggcgaggggctgatccgcggcaagacgccgcgcggcacgtcc
accatcacccagcaggtcgccaagaatctcggcgtcggcaacgaggcgagttacacgcgc
aagctgaaggaggcgatcctcgcctggcggatcgaggatacgctcagcaagcagcagatc
atggaattgtacctcaatttcatcgagctggggcgcaattccggcggcgtggcggcggcg
agcgacgcctatttcggcaagccgctcgacaagctgagccttgcccagatggcctatctg
gcgatccttcccaagggcccggccaattacgatcccgatcgcaatacccagcgcgcgctc
gatcgccgcaactgggtgctgggcgagatgctgcggaacggcttcatcaaccgggcgcag
catgacgaggcggtggcgtcgccgctcggcaccgtgccgcgccagacgccgcggttcgag
cgggtcggcggctatttcgtcgaggaagtccgccgccagctcgcccgaaccttcggcgaa
aatccggacgacgggccatacagcgtatatggcggcggcctgtgggtgcgcagctcgctc
gatcccaagatccaggcctatgcacagcgggcgctgcgcgacggcttgttgcggttcgat
cgcgggcgcggctggtcggggccgatcggcaaggcgccgttcgaaggcgacggctggtat
tcggcgttcgtctccaagaacatcggcgtcgattacgacaattggcgtgctgcagtggtg
atcgcccgcgattcgcgcagcgcgcagctcggcttcgacgatggcgacaccggcacgatg
tccgccagcgccgccgcgatgccgatccgcggcaggggcggtcatgccttcgacgcgatc
aaggtcggcgacatcctcgccgttgccccggagggcgggcaatggggcctgcgcagcgtg
ccccggatctcgggcgggatggtcgtcgaggatcccgcgaccggccgggtgctggcaatg
cagggcggtttcgattcgcgcctccaggccttcaaccgcgccacccaggcgacccgccag
ccgggctcgacgatcaagccgatcgtctatgccgccgcgctcgagaacgggatgacccct
gcctcgatcgtcgtcgatggccccttctgcgtatggcagggtgccgggctcggccagaag
tgcttccgcaacttcggcaatgcccgcggcgccggcccgcacacgctgcgctggggcatc
gagcagtcgcgcaacctgatgacggtgcagatcgccaacgccaccggcatggacaaggtg
gtcgacgtgatccagcggctgggcgtgtcgaagaaccggctgccgccctatctttcctat
gcgctcggcgcgggcgagaccacggtgctgcgcatggtcaacgcctattcgatcctggtg
aatcagggccgtgcactcaaccccacgctgatcgacttcgtccaggatcgccgcggccgc
gtgatcttcccggcggggtggcgcgcctgttcgggctgcaatgcgcgcgactgggacgga
aagtcgatgccgcgcccgatcgtccgcgcgcgccagctgatcgatccgatggtcgcctat
cagatggtccacatcaccgagggcgtgatccagcgcggcactgcgacggtgctgcgcgac
cttggccgtccgatgatgggcaagaccggcaccaccaccggcccgacggacgtgtggttc
gtcggcgggaccccgcagatgatcggcgggctttatctgggctatgatacgccgtccaat
ctcggcggctatgcgcagggcggggtgatcgcggcgccgatcttcaaggagttcgcgatc
ccggcctatgcggggctggagccgctgcccttcgtcgcgcccccgggcgtccgcatggtg
cggatcgatcgcggcagcggtcgtccggtgcagggcggctggccgagcgacgacccgctc
tcctcgatcatctgggaagccttccgccccgatacggatccgcggcgcacgcgccgcacc
gcgaacgaggaggcgcccgtcgccgccgcgaccgcgccggtgcagcgcaagacggacaag
cagaccgacagcgacttcttgcaacggcagggcggaatctactag
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