KEGG   Sphingomonas sp. R1: OIM94_14185
Entry
OIM94_14185       CDS       T11062                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sprr  Sphingomonas sp. R1
Pathway
sprr00300  Lysine biosynthesis
sprr00470  D-Amino acid metabolism
sprr01100  Metabolic pathways
sprr01110  Biosynthesis of secondary metabolites
sprr01120  Microbial metabolism in diverse environments
sprr01230  Biosynthesis of amino acids
Module
sprr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sprr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    OIM94_14185 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    OIM94_14185 (dapF)
Enzymes [BR:sprr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     OIM94_14185 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: UYY76647
LinkDB
Position
2967093..2968037
AA seq 314 aa
MRIDYIKCHGSGNDFPLIDARALALGEPEWATLARLLAERGGPVGGDGLLALVPGDDAHA
FGMRMWNSDGSEAETCLNGLRCTARLGFDLLGLDAAQVKLKTSSAQVARDPEIAPGVATI
RTLVGPNSTRSADVGLVGAPEQVIDAPIPGLPNARAFTAVAMPNPHLVTFVDTVDEDELV
ALGTWCESRPALLPARGNVSFVEVRGPSRLYVRTFERGVGLTDSCGSAMAASVLSAALTG
RTAFGVPVEVFNRGGMVRGQAEADRRVMLSGNATFEGAFAIEADLAAGVLGAPEPLAPRP
AEQAAWAAAVAALR
NT seq 945 nt   +upstreamnt  +downstreamnt
atgcgcatcgactatatcaagtgccatggttcggggaacgacttcccgctgatcgacgcc
cgtgcgctcgcgctgggcgagccggaatgggcgacgctcgcccgcctgctggccgagcgc
ggcggcccggtgggcggcgacggcctgctggcgctggtgccgggggatgacgcccatgcc
ttcggcatgcggatgtggaattcggacgggtccgaagccgagacctgcctgaacggcctg
cgctgcacggcgcggctcgggttcgatctgctcgggctggatgccgcgcaggtgaagctg
aagaccagctcggcgcaggtcgcgcgcgatcccgagatcgccccgggcgtggcgacgatc
cgcacgttggtcgggcccaattcgacgcgcagcgcggatgtcggcctggtcggtgcgccc
gagcaggtgatcgacgcgccgattccgggcctgccgaacgcccgcgccttcaccgccgtg
gcgatgcccaacccgcatctcgtcaccttcgtcgatacggtcgacgaggacgagctggtg
gcgctcggcacctggtgcgagagccgcccggcgctgctgccggcgcgcggcaatgtttcg
ttcgtcgaagtgcgcggtccgtcgcgcctgtacgtccgcaccttcgagcgcggcgtgggg
ctgaccgacagctgcggcagcgcgatggcggcatcggtgctcagtgccgcgcttaccggg
cgcaccgcgttcggcgtgcccgtcgaggtgttcaaccgcggcggcatggtccgcggccag
gccgaggcggatcggcgcgtgatgctgagcggcaatgccaccttcgagggggcgttcgcg
atcgaggcggatctcgcggcgggcgtgctcggcgcgcccgaaccgctggcgccgcgcccc
gccgagcaggccgcatgggccgctgccgtcgccgccctacgctga

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