Sphingomonas sp. R1: OIM94_14290
Help
Entry
OIM94_14290 CDS
T11062
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_14290
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_14290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OmpA_membrane
Surface_Ag_2
Campylo_MOMP
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
UYY76667
LinkDB
All DBs
Position
2984788..2985912
Genome browser
AA seq
374 aa
AA seq
DB search
MRKLAVTLALATTALSTPAFARDDAWYVGVEGGAMLVEDIHFDVGASKDVVTQNNHVGYD
VGGNIGYDFGPFRAEAEVSYRRARVDSARTSVPIATNAFPAPAGSYEQASGSTSALSFMI
NGLLDFGDDNGLQGFVGGGAGVARIKDRLRVSGPADTVNDSDTVFAWQAIAGVRAPINKN
VDVSLKYRFFNAPDVKLTDIGGNQWKGRYRSHSLLVGLTYNFGAPEPAPVPPPPPPPPAP
VAEPAPPPPPPPAPEAKVCTPGPYIVFFDWNKSDVTPEAASILDNAISNYADCSNTQVVL
AGHADRSGSASYNVGLSQRRADSVKAYMTGKGIPTGVITTEAFGESRPRVQTADGVRELQ
NRRVEITYGPGSGQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcttgccgtcactttggcgctcgccacgaccgcgctgagcacgcccgccttc
gcccgcgacgacgcgtggtatgtgggtgttgaaggcggcgcgatgctcgtcgaggacatt
cacttcgacgtcggcgccagcaaggatgttgtgacgcagaacaaccacgtcggctacgac
gttggtggcaacattgggtatgactttggtccgttccgtgcggaagccgaagtcagctat
cgccgcgctcgcgtcgacagcgcccgcacctcggttccgatcgcgaccaacgcgttcccg
gctcctgccggcagctacgagcaggcgagcgggagcacctcggcgctttcgttcatgatc
aacggcctgctcgacttcggtgacgacaacggcctgcagggcttcgtcggcggtggtgcc
ggtgttgctcgtatcaaggatcgtctgcgcgtctcgggtccggcagacaccgtcaacgat
tcggacaccgttttcgcctggcaggcgattgccggcgtccgcgcgccgatcaacaagaac
gtcgacgtgtcgctgaagtaccgcttcttcaacgcaccggacgtcaagctgacggacatc
ggcggcaaccagtggaagggccgttaccgctcgcacagcctgctggtcggtctgacctac
aacttcggtgcgccggagccggctccggttccgccgccgcccccgccgcccccggccccg
gttgccgagccggctccgccgcccccgccgcccccggctccggaagccaaggtctgcacg
cctggcccgtacatcgtgttcttcgactggaacaagtcggacgtcacgccggaagcagcg
agcatcctggacaatgcgatcagcaactacgccgattgcagcaacacccaggtcgttctg
gccggccacgccgaccgttcgggctcggcaagctacaacgtgggtctgtcgcagcgtcgc
gcggactcggtgaaggcctacatgaccggcaagggtatcccgaccggcgtgatcaccacg
gaagcgttcggcgagagccgcccgcgcgtccagaccgccgacggcgttcgcgaactgcag
aaccgtcgtgtggaaatcacctacggtccgggttcgggtcagtaa
DBGET
integrated database retrieval system
