Sphingomonas sp. R1: OIM94_16135
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Entry
OIM94_16135 CDS
T11062
Name
(GenBank) exonuclease domain-containing protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OIM94_16135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprr03400
]
OIM94_16135
DNA repair and recombination proteins [BR:
sprr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
OIM94_16135
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NCBI-ProteinID:
UYY77007
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Position
3375179..3375943
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AA seq
254 aa
AA seq
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MAPPTPSIIRVIDLETTGDKPPAHAVCEIGWQDVALGADGRWELYGEGGNRLVNPGRGIP
PLTMAIHHIRDEDVADAPYWHDVARPILDPWPRRIALAAHRASFEEQFCTPALTRGADWI
CTWKCALRLWPDSPGFSNQMLRYWRRPEGMEHERGLPAHRAFPDAYVTAHHLRDMLNEAS
VAQLVEWSSQPGLLPRVRYGPDRGKEWSEISEDSLEGFLTDRDEDVRFTAETELARRRGG
APVGRGSSTQRLLF
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccaaccccctcgatcatccgtgtcatcgacctagaaaccaccggcgacaag
ccgcccgcccatgccgtctgcgagatcggctggcaggatgtggcgctgggcgccgacggc
cgctgggagctgtatggcgagggcggcaaccgtctcgtcaatccgggccgcggcatcccg
ccgctcaccatggcgatccatcatatccgcgacgaggacgtggccgacgcaccctattgg
cacgacgtcgcgcgcccgatcctcgatccctggccgcgccgcatcgcgcttgccgcgcac
cgcgcgagcttcgaggagcagttctgcacccccgcgctcacgcgcggcgccgactggatc
tgcacctggaaatgcgcgctgcggctctggccggacagccccggcttctccaaccagatg
ctgcgctactggcgccggcccgagggtatggagcatgagcgcggcctgccggcgcaccgg
gcgtttcccgatgcctatgtgaccgcgcaccatctgcgcgacatgctcaacgaggcaagc
gtggcacaactggtggaatggtcgagccagccggggctgttgccgcgggtgcgctacgga
cctgatcgcggcaaggagtggagcgagatctccgaggattcgctcgaaggcttccttacc
gatcgtgacgaggatgtgcgcttcaccgcggagacggaacttgcgcgccggcggggcggg
gcgcccgtggggcgggggagctcgacgcagcggctgctgttctag
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