Sphingomonas sp. R1: OIM94_16300
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Entry
OIM94_16300 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K16090
catecholate siderophore receptor
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_16300
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_16300
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UYY77039
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Position
3401690..3404182
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AA seq
830 aa
AA seq
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MRSSSPASSSRLPAFLALACVGFVATAPAHADSDGTGSDPDDQDRIVVNGQRAAEQVGPK
AVAPVVNTPRSVVVLTDEIINQTGSTTLADALRTVPGITFGAAEGGNPIGDRPFIRGFDS
QGSTFVDGVRDIGAQTREVFATDRVQIVRGSDSTLGGRGSAGGSINIISKLPVAGNFVSG
SASVGTANFRRFTLDVNERVTDKIGVRIAGMFHDQDVAGRDAIWNRRWGIAPSITLGMGT
DTRLTAAYYYTESHELPDSGIPFRYTLANAPGTGTIYSEPVMGSFTTMGGQTGTVSRSAF
YGVASRDFRDTQVHQATLRAEHDFGGVTLRNTARYGYTNQSYIFTLPDDSQGNIYGTATA
NPTTGQAGARGDVLTGGYVWRRGNTRYGYTETLTNQTDLFGTFKTGGIEHSFSTGVEISW
EKARRGALVSANGSTISPRCNSATIARFYCASVFNPNPNDAWVNYASDTSTTPTAIVKGA
PITETQNDAHTVSVYGFDSITLVPQLILNLGVRYDHFESTVTPGQAATATSTFSLSKTNN
LFNWQAGLVFKPTKNTSLYASYATAATPPNSLLGEGQEGNALGTTNTTTALALLDSLKVE
KTKSYEIGAKANLFREQLALGLALFQTDTDNARVTSADNTVEFVGKRRIRGVELTFNGNV
TKWLTVFGGYTHLDPKIVDGGFTALTAAAVGTQAAKTVLVPSVNTGRQATQTARDSFTLS
ANIKPTRRFSFGGGAYYMSRVFGGYQDNRTATQNAAGVVTVSPATKLLVRTVPSYWRFDA
QAGYQLTDKIRISANIQNLTDKTYYTQAYTSHYATIAPGRSAFATLNVKF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttcctcttctcctgcgtcgtcttcccgccttcccgcctttctcgcgctcgcctgt
gtaggctttgtcgccaccgcgcccgcccatgccgattccgacggcacgggatcggatccc
gacgatcaggaccggatcgtcgtcaacggccagcgcgccgccgagcaggtgggccccaag
gcggtggcgccggtagtcaatacgccgcgctcagtggtggtgctcaccgacgagatcatc
aaccagaccggctcgaccacgctggccgatgcgctgcgcaccgtgcccggcatcaccttc
ggcgcggccgagggcggcaatccgatcggcgatcgtcccttcatccgcggctttgacagc
cagggctcgaccttcgtcgacggcgtgcgtgacatcggcgcgcagacccgcgaggtgttc
gccaccgatcgcgtccagatcgtccgcggctcggattcgacgctgggcggccgcggcagc
gccggcggttcgatcaacatcatctcgaagctgccggttgccggcaacttcgtctcgggc
tcggcgagcgtcgggaccgccaatttccgccgcttcacgctggacgtgaacgagcgggtc
acggacaagatcggcgttcgcatcgccggcatgttccacgatcaagatgtcgccggccgc
gatgcgatctggaaccgccgctggggcatcgcgccctcgatcacgctcggcatgggcacc
gacacgcgtctcaccgccgcctattactataccgaaagccacgaactgcccgacagcggc
attcccttccgctacacgctggccaacgcgccgggtaccggcacgatctacagcgagccg
gtgatgggcagcttcaccaccatgggtgggcagaccgggacggtttcgcggtccgctttc
tacggcgtggccagccgcgatttccgcgatacgcaggtccaccaggcgaccctgcgcgcc
gagcatgactttggcggcgtcacgctgcgcaacactgcgcgctacggctataccaaccag
tcctacatcttcacgctgccggacgacagccagggcaatatctacggcacggccacggcc
aacccgacgaccggccaggcgggcgcgcgcggcgacgtgctcaccggcggctatgtctgg
cgtcgcggcaacacgcgctacggctataccgagacgctgaccaaccagaccgatctgttc
ggcacgttcaagaccggcggtatcgagcacagcttctcgacgggcgtcgagatcagctgg
gaaaaggcgcgacggggcgccctggtttcggcgaatgggtccacgatcagcccgcgctgc
aacagtgcgacgatcgctcgcttctattgcgccagcgtgttcaacccgaacccgaacgat
gcgtgggtgaactacgccagcgacacctccacgacgccgaccgcgatcgtgaagggcgcg
ccgatcaccgagacgcagaatgacgcgcacacggtgtcggtctatggcttcgattcgatc
acgctggtgccgcagctgatcctgaacctcggcgtgcgctacgatcatttcgaatcgacc
gtcacccccggccaggcggcgaccgcgaccagcaccttcagcctgagcaagaccaacaac
ctgttcaactggcaggccggcctggtcttcaagccgacgaagaacaccagcctctacgcc
agctatgccaccgctgcgaccccgccgaacagcctgctcggggaagggcaggagggcaat
gcgctcggcaccaccaacaccaccaccgccctcgcgctgctcgacagcctgaaggtggaa
aagaccaagtcctatgagatcggtgccaaggccaacctgttccgcgagcaactcgcgctg
ggcctggcactgttccagacggacaccgacaatgcccgtgtcaccagcgcggacaacacc
gtggagtttgtcggcaagcgtcggatccgcggcgtggagctgaccttcaacggcaacgtc
accaagtggctgaccgtgttcggcggctatacccacctcgatccgaagatcgtcgatggc
ggcttcaccgcgctcacggcggcggcggtcggcacccaggcggccaagacggtgctcgtc
ccctcggtcaacaccgggcgccaggcgacccagaccgccagggacagcttcaccctgtcg
gccaacatcaagccgacgcgtcggttcagcttcggcggcggcgcctattatatgagccgg
gtgttcgggggctatcaggacaaccgcaccgctacccagaatgcggcgggcgtggtgacg
gtcagtccggccaccaagcttctggtgcgcaccgtgccctcgtactggcgcttcgatgcg
caggcgggctatcagctgaccgacaagatccggatcagcgccaacatccagaaccttacc
gacaagacctattacacccaggcctatacttcgcactatgcgacgatcgcgccgggccgt
tcggccttcgcgacgctgaacgtaaagttctga
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