Sphingomonas sp. R1: OIM94_16565
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Entry
OIM94_16565 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_16565
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_16565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UYY77088
LinkDB
All DBs
Position
complement(3468017..3470257)
Genome browser
AA seq
746 aa
AA seq
DB search
MGRRYGWMVAGLLAGIAPPALAQAQEAATPAAQSNDIVVTARFRNENLQDVPIAVSVVNG
DAAASRNLNTLQDLSTVIPTVDFRNGQSNKDRTVFVRGVGTITTSPGVESSVSTVIDGVV
LVRPGQATLDLLDLDHLEVLRGPQGTLFGKNASAGVINLVTKAPSKVQTETLEAGYYEGG
EGRIKGSVSGPITSTIGYALSGLYASYKGNVFNVGTGHKVNGYDRWGVRGKIVARPNDDV
TITFAGDYLYNRDNTPQGVYVSSSRVAFPTNVVTPNPTLAGLLTQEGTPPSANNKRVNTN
FDAEVRDRNYGGSITLDWRLGGGYTLTSITAYREWRNHQTPDWDARAILATGFPQGRDDG
RVDFDQFSQEIRLASPQGGLVDYVVGAYLLAADTDERYQRSVTQLIGGAPVTNNGVANYG
IHAQNHALFGEANLHATDTLTFIAGGRLIHDSLSYFHQRVSDTATGVAGIRPSFASSGKT
DRVDYSARAGVQYKLAPNANTYFTFSRGYKGPAYNVFFNMQAFDTEPLAPETSTSYEVGL
KGSLFDGRFSGGIAAYLTNYDGFQANYADTYLGAIVTRLINAGSVQTKGVEADLNARPTD
HLTLNFAVARTDAHIRHFNCPAATSCTSLDGQPLPFAPDWKLSGGAAWKLPITDGLAVEL
QTDASYKTKTQYAITQTPDTIQPAYGIWNASIALIGGERWELRALVKNILDQHYANYLVY
GTTAGVARYVPRDNDRYVGLNARIRY
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaggtacggatggatggtcgcgggtctgctggcggggatcgccccgcccgcg
ctggcacaggcgcaggaggcggccacaccggcggcccagtcgaacgacatcgtcgtcacc
gcgcgctttcgcaacgagaacctccaagacgtgccgatcgccgtctcggtagtgaacggt
gatgccgctgcctcgcgcaaccttaacacgctgcaggacctctcgaccgtcatcccgaca
gtggacttccgcaacggccagtcgaacaaggatcgcaccgtgttcgtccgcggcgtcggc
acgatcaccacgtcgccgggcgtcgagagctcggtctcgacggtgatcgacggcgtggta
ctggtgcgtccgggtcaggcgacgctcgacctgctcgatctcgaccatctcgaggtgctg
cgcggaccgcagggcacgctgttcggcaagaacgcctcggccggcgtgatcaacctcgtc
accaaggcgccgagcaaggtccagaccgaaacgctggaggccggctattacgaaggcggc
gaagggcgcatcaagggcagcgtctccggtccgatcaccagcactatcggctatgcgctg
agcgggctctacgcctcgtacaagggcaatgtgttcaacgtcggcaccggccacaaggtg
aacggctatgaccgctggggcgtgcgcggcaagattgtcgcgcggcccaatgacgatgtg
acgatcaccttcgccggcgactatctatacaaccgcgacaacacgccgcagggcgtctat
gtcagttcctcgcgcgtggccttcccgaccaatgtggtgacgccgaatccgacgctggcg
gggctgctcacccaggaaggcaccccgccctcggccaacaacaagcgagtcaacaccaat
ttcgacgctgaggtgcgcgatcgcaactatggcggctcgatcacgctcgattggcggctg
ggcggcggctacacgctgacctcgatcaccgcctatcgcgaatggcgcaaccaccagaca
ccggactgggacgcgcgcgcgatccttgccacgggtttcccgcagggccgcgacgacggg
cgcgtcgatttcgaccagttctcgcaggagatccgcctcgcgtcgccgcagggcgggctg
gtcgactatgtggtcggcgcctatctgctcgccgccgacaccgacgagcgctaccagcgc
agcgtcacccagctgatcggcggtgcgccggtcaccaacaacggggtggcgaactacggt
atccacgcacagaaccatgcgctgttcggcgaggcgaacctccacgcgaccgacacgctg
accttcattgcgggcgggcggctgatccacgattcgctcagctatttccaccagcgcgtg
tcggacaccgcgaccggcgtggcaggcattcgccctagcttcgccagcagcggcaagacc
gaccgggtggactacagcgcccgcgccggcgtgcagtacaaactggcgcccaacgccaac
acctatttcaccttctcgcgcggctataagggcccggcctacaacgtcttcttcaacatg
caggcgttcgacaccgagccgctcgcgcccgagacttcgaccagctacgaagtgggcctg
aagggcagcttgttcgacggcaggtttagcggcggcatcgcggcgtatctcacgaattat
gatggcttccaggcgaactatgcggatacgtatctgggcgcgatcgtcactcggctgatc
aacgccggcagcgtgcagaccaagggcgtcgaggccgacctgaacgcacggcccaccgat
cacctgacgctgaacttcgcggtggcgcgcaccgatgcgcatatccggcacttcaactgc
ccggccgccaccagctgcacctcgctggacggccaacccctccccttcgcgccggactgg
aagctgagcgggggcgctgcctggaagctgccgatcaccgacggcctggcggtcgagctg
cagacagacgccagctacaagaccaagacccagtacgcgatcacccagacgccggacacg
atccagcccgcctatggcatctggaacgccagcatcgcgctgatcggcggcgagcgctgg
gagctgcgcgcgctggtcaagaacatcctcgaccagcactatgccaattatctggtctat
ggcaccaccgcgggcgtggcccgttacgtgcctcgggacaatgatcgctatgtcggcctg
aatgcgcgcatccgctactga
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