Sphingomonas sp. R1: OIM94_16940
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Entry
OIM94_16940 CDS
T11062
Symbol
rpsM
Name
(GenBank) 30S ribosomal protein S13
KO
K02952
small subunit ribosomal protein S13
Organism
sprr Sphingomonas sp. R1
Pathway
sprr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OIM94_16940 (rpsM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sprr03011
]
OIM94_16940 (rpsM)
Ribosome [BR:
sprr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OIM94_16940 (rpsM)
Bacteria
OIM94_16940 (rpsM)
Archaea
OIM94_16940 (rpsM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S13
H2TH_5
NFACT_N
DNA_pol_lambd_f
HHH_5
HHH_7
Motif
Other DBs
NCBI-ProteinID:
UYY77159
LinkDB
All DBs
Position
3547700..3548068
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AA seq
122 aa
AA seq
DB search
MARIAGVNIPTNKRVVIALQYIHGIGPAKAKELTTQLGIAPERRVQDLSDQEVLQIREAI
DAGYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK
KK
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtattgcgggtgttaacatcccgaccaacaagcgcgtcgtcatcgcgctgcag
tatatccacggcatcggccccgcaaaggccaaggaactgaccacgcagctcggcatcgcg
ccggagcgccgcgtgcaggacctgagcgaccaggaagtgctgcagatccgcgaagcgatc
gacgccggctacaccgtggaaggtgatcttcgtcgccaggtggcgatgaacatcaagcgc
ctgatggacctggcctgctatcgcggcctgcgtcaccgcaagggcctgccggtccgcggc
cagcgcacgcacaccaatgcgcgcacccgcaagggcaaggccaagccgatcgccggcaag
aagaagtaa
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