Sphingomonas sp. R1: OIM94_17105
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Entry
OIM94_17105 CDS
T11062
Name
(GenBank) DEAD/DEAH box helicase
Organism
sprr Sphingomonas sp. R1
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GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UYY77189
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All DBs
Position
complement(3585229..3588510)
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AA seq
1093 aa
AA seq
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MFDAQTAALIRSAPALAGVDPAMLPQELTGIYAELAGLRLRAAVLAEQPDYLAQLERIER
IATIYEALVDSGAEDHERRAAAFVAGTAYQLLGRLRPDLEERDHLLTMRAIDPRVSAPLL
FLIAEQSPDAREAARELAGPRLEDIHRGALVESIEDLALERFEAILARADRLAGLRPGAD
APFDERATQALYGLCWSGLVQMVARLLDRPLVELAYQAFDTPRQAFERVVALATQSLDLP
ETGLNITSSYAGPRHLARLLMHVADGLDEAGVTRIPPPADAEENSWKLWVRHRAASRPVL
WPNHRAAVATNFLDVGKSAVLVLPTGAGKTTLSELKIASTLSTGKKVIFLVPTLALVDQL
RDDLAESFPESLIDSVVSADGDLTALIRGPELESIEVMTPERCLALLSFTETDMSDLGLL
VFDECHLLSPDGGGSRSVDAMLCLLHAIKRAPNADLLLLSAMLKNAEEVADWLATITERP
CIGFHDPWKPSRQARGVVIYPEAQVDAATVIVRRKKRLKKAYKAPPLNADPYALFGLHHA
WLKTVATDTRLVRLSDAPVELGHGTGGATPNANDVGAALAKNAARAGLKTIMFVQQADHA
PSTAKRLKGKLPVPPDLTETENSLWADAVAELGAASCSLFDPAAPAIPHNGDMIPLERRL
AESVFKKIGGVNVIIATPTLAQGMNLPAQVAILAGTMRHGDEGRTPLEGHEILNAAGRAG
RAGYLANGTVLLIPEPVVRFDANSLPDNEAFKMLKAVLPENDQCVEIDDPLTPLLDSIQA
GDLSGAGVRYFLSRLRAGEAEETAVEKAVEMISRSLAAYQARQAKEHEEFGLKLGSLKTA
LDTATKETSVPVMQIAAFTGLAVEPLAAIAAKVEAEIDALPSTVCGWMEWLVDFLIADRA
SYALLFGNAVETVKAVTRGAKTGGDSTDAEMALLKTALAAWLRGEPFYQIEAALGVPANK
IGVCKRTRDLINQIANRQLYMVAAAATEVIRQTLLTKEKVAANPAVLEILAYAIRRGLDS
PEKVAFAYRNPSARSRVLLHRAFAEKIGDREPMLGSDFEHVMRHLDAVLAFGAFDRSAFI
GDPDPSASAQDPL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgctcagacagctgcgctgatccgcagcgcgccggccctggccggagtcgat
ccggcgatgctgccgcaggaactgacgggcatctatgccgagctggccggcctccgactg
cgcgctgcagtactcgcagagcagcccgactacctcgcccaactggagcgtatcgagcgg
atcgccaccatctacgaagccctggtggatagcggtgccgaagatcatgagcgacgggcg
gcggccttcgtcgcggggacggcctaccagcttctgggcaggcttcgtccggatctcgag
gagcgcgaccatctcttgacgatgcgggcgatcgatccgcgcgtttcggcaccgcttctg
ttcctgattgccgagcagagcccggacgcgcgcgaagccgcgcgtgaacttgcgggcccc
cggctggaagacattcaccgcggcgctctagtcgagagtatcgaggacctcgccttggag
cgatttgaagcgatcctcgcacgggccgaccgattggcggggttgcggccgggcgctgat
gcgcccttcgacgaacgcgcgacccaggccctgtacggcctgtgctggagcggtctggtg
cagatggtcgcacgattactcgatcgccccctggtggagctagcgtatcaggccttcgat
acgccccggcaggccttcgagcgagtagtagcgctcgccacgcagtccctcgatcttccg
gagacggggctaaacatcacgtcgagctatgcgggaccgcgtcatctggcgcgtttgctc
atgcatgtggcggacggtcttgacgaggcaggcgtgacgcgaattccgccgcctgccgac
gcggaagagaattcgtggaaattgtgggttcgccaccgcgcggcaagcaggcccgtcctc
tggccaaatcatcgcgcggctgtggcaacgaactttctggatgtcggcaagtcggccgtc
ctcgtccttccgacgggggccggtaagacgacgctttcagagctcaagatcgcgtcgacg
ctgtccaccggcaagaaggttatctttctggttccgaccctggcgcttgtggaccagctc
cgcgatgatctggccgaaagctttccggaaagtctcatcgatagtgtggtctcggcggac
ggcgatctgaccgccctcatccgtgggccggagcttgaatcgattgaggtgatgacgccc
gagcggtgcctcgcacttttgagtttcaccgagaccgacatgagcgatctcggtttgctg
gtcttcgacgaatgccatctgcttagccctgatggcggtgggtcgcgcagtgtcgatgcg
atgctgtgcttgctccacgcgatcaaacgcgcgcccaacgcggacctgctcctgctctcg
gcgatgctcaaaaacgccgaggaggtcgctgactggctcgccaccatcaccgagcgtccg
tgcatcggatttcacgacccttggaagccgagccgtcaggcacgcggcgtagtaatatat
cctgaggcgcaggtggatgcggcgacggtgatcgtccggcggaaaaagcggctcaagaaa
gcctacaaagcgccgccgctcaatgctgacccctatgccttgttcggccttcatcatgct
tggttgaagacggttgcgactgacacccggctcgttcggctgtccgatgctcccgtcgag
ttggggcacgggaccggcggcgccactccaaacgccaatgatgtcggcgccgcacttgcc
aagaacgccgccagggccgggctgaaaacgatcatgttcgtccagcaagccgaccacgca
ccatcgacggccaagcgcctcaagggcaagctgcccgtaccaccggacctcactgagacc
gaaaacagtctatgggccgacgcggtagcggagctcggtgcggcaagctgctcgctgttc
gaccccgcagctccggcaattccgcacaacggggacatgatcccgcttgaacgccgttta
gccgaatccgtctttaagaaaatcggaggcgtgaacgtcatcatcgcgaccccgacgctc
gcccaaggtatgaacctgccagcgcaggttgccatcctcgccggcacgatgcggcatggc
gatgagggtcgcacgccgcttgagggccacgaaatactgaacgccgccgggcgggcaggt
cgcgccggatatctggccaatggaacggtgctgctgatccccgagccggtcgtgcggttt
gacgcgaactcgcttcccgacaatgaggccttcaaaatgctgaaggcggtgctgcctgaa
aacgaccagtgcgtggagattgacgacccgctgacgccgctgctcgacagcattcaagcc
ggcgatctgtcgggcgccggcgtacgctacttcctcagccggctgcgagccggcgaagcg
gaagagacagccgtcgagaaggcggtggagatgatcagccgctctcttgcagcctatcaa
gcacggcaagccaaagagcatgaagagtttggcctgaagcttggctcattgaagactgcc
ctcgataccgcgaccaaagagacctctgtgccggtgatgcagatcgccgctttcacaggg
ttggcggtcgagccgctcgcagcgatagccgcgaaggtcgaagcggagatcgatgcgcta
ccgtcgactgtgtgcggctggatggaatggctggtcgatttcctgatcgctgatcgggcc
agttacgcgctgctgttcggtaatgccgtcgaaaccgtgaaggcggtgacgcgtggggcg
aagaccggcggtgacagcacggatgctgaaatggcgctgctcaagaccgcattggcagcg
tggctgagaggcgagcctttctatcagatcgaggccgcgctcggcgttcccgctaacaag
atcggtgtctgcaaacggacgcgcgacctgatcaatcaaatcgccaatcgccagctctat
atggtcgcggcggcggcgacggaagtcattcggcagacgttgctcaccaaggagaaggtc
gcagcaaacccagcagtacttgagatcctggcttatgctattcggcgcggcttagactct
ccagaaaaggtcgccttcgcctatcgaaaccccagtgcgcgatcacgcgtcctgctgcat
cgagccttcgctgaaaaaatcggagatcgcgagcccatgctcggttccgatttcgagcac
gtgatgcggcatctcgacgccgtcttggccttcggcgcgttcgatcgctcagcgtttatc
ggagatcctgatccgtcggcgagtgcacaagacccattatag
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