Sphingomonas sp. R1: OIM94_17210
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Entry
OIM94_17210 CDS
T11062
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00910
Nitrogen metabolism
sprr01100
Metabolic pathways
sprr01120
Microbial metabolism in diverse environments
sprr01310
Nitrogen cycle
Module
sprr_M00531
Assimilatory nitrate reduction, nitrate => ammonia
sprr_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
OIM94_17210 (nirB)
Enzymes [BR:
sprr01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
OIM94_17210 (nirB)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox
DAO
Pyr_redox_3
NAD_binding_8
GIDA
FAD_binding_2
NAD_binding_9
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
UYY77208
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Position
3611000..3613501
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AA seq
833 aa
AA seq
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MEFLDPGTPLADDSPAQAGEPVVACAHLVVIGNGMAGCRAVEELLARDGTRFRITIFGAE
PHVNYNRIMLSPVLAGEKTFQEIVINDTDWYARHGIELVAGDPVVAIDRTARTVTARSGR
ITGYDKLLIATGSDPFLIPVPGHDLPGVISFRDMADVDAMLAAANGGGDAVVIGGGLLGL
EAAHGLSLRGMKVTVLHLMPTLMERQLDEAAGWLLKSALEARGQTILTGADTAAILGTDK
VEGVQLKDGRVIPAKLVVMAVGIRPSVRLAREAGLAVGRGIQVDNHMVTSDANILAVGEC
VEHDGQCYGLVAPLWDMCRSLADGLVARANPYRGSVTSTKLKVAGLDVFSAGDFSGGEGC
EDIVLRDAARGIYKRVVLKDDRIVGAVLFGDTGDGGWYFDLLKKGEDVAPIRDVLIYGQV
FASGGGQADPKAAVAALSEDAEICGCNGVSKGQVVATINGGACSLDAVRAGCKASASCGS
CTGIVEQLLALTLGEDGVQAGPKTMCKCTSYGHDEVRRAIVAQGMKAIPEVMQTLHWSTP
DGCSSCRPALNYYLLCAWPGEYVDDQQSRFVNERLHANIQKDGTYSVVPRMWGGVTTPGE
LRAIADVVEKYNAPMVKVTGGQRLDIFGIRKEDLPAVWADLNAAGMVSGHAYAKALRTVK
TCVGSEWCRFGTQDSTGLGIKLERGFWGSWMPHKFKMAVSGCPRNCAEATIKDFGVVCVD
SGYELHVGGNGGIHVRATDLLVKVTTEEEAMHYAAAFVQLYREEARYLERTAPWIERVGL
AYVKARVVEHEAGRDALAARFWHSQSFSQDDPWAERVAGADASLHQPLLAAAE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctcgaccccggcacccccctggccgacgacagccccgcacaggcgggggaa
ccggtcgtcgcctgtgcgcacctcgtcgtcatcggcaacggcatggccggctgccgcgcg
gtggaggaactgctcgcccgtgacggcacgcgcttccgcatcaccattttcggcgccgag
ccacatgtgaactacaatcggatcatgctctccccggtgctggcgggcgagaagacgttc
caggagatcgtgatcaacgataccgactggtatgcccggcacggcatcgagcttgtcgcc
ggcgatccggtggtggcgatcgaccgcactgcgcgcaccgtcaccgcgcgctcgggacgc
atcaccggctatgacaagctgctgatcgccactggctccgatcctttcctcatcccggtg
cccggacacgacctgcccggcgtgatcagtttccgcgacatggccgatgtcgatgccatg
ctggcagcggcgaacggcggcggcgacgcggtggtgatcggcggcgggctgctcgggctg
gaggcggcgcacggcctctccctgcgcgggatgaaggtcacggtgctccacctgatgccg
acgctgatggaacggcagctggacgaagcagcgggctggctgctcaagtcggcgctggag
gcgcgcggccagacgatcctcaccggcgccgacacggccgcgatcctcggcacggacaag
gtggagggcgtgcagctgaaggacggccgcgtgatcccggccaagctggtggtgatggcg
gtcggcatccgtccctcggtccggctcgcccgcgaagcggggctggcggtcgggcgcggc
atccaggtcgacaatcatatggttaccagtgatgccaatatcctcgcggtcggcgagtgc
gtcgagcatgacgggcaatgctacggcctggtcgcgccgttgtgggacatgtgccgcagt
ctggcggacgggctggtggcgcgcgccaatccctatcgcggctcggtcacctcgaccaag
ctcaaggtcgccgggctcgacgtgttctcggccggcgacttctccggcggcgagggctgc
gaggacatcgtcctgcgcgatgcggcacgcggcatctacaagcgggtggtgctgaaggac
gaccgcatcgtcggtgcggtgctgttcggcgataccggcgacggtggctggtatttcgat
ctgctgaagaagggcgaggacgtcgcccccattcgcgacgtgctgatctacggccaggtc
ttcgcctcgggaggggggcaggcggaccctaaggcggccgttgcggcgctctcggaggat
gccgagatctgcggttgcaacggcgtttccaagggccaggtggtcgcgacgatcaacggc
ggcgcgtgcagcctcgatgcggtgcgggcgggctgcaaggcctcggccagctgcggatcg
tgcaccggcatcgtcgagcagctgctcgcgttgacgctgggggaagacggtgttcaggcc
ggccccaagacgatgtgcaaatgcaccagctacggccatgacgaggtgcgccgtgcgatc
gtcgcgcagggcatgaaagccatcccggaggtgatgcagacgctgcactggtcgacgccc
gacggctgttcctcctgccgcccggcgctcaactattacctgctctgcgcgtggccgggg
gagtatgtcgacgaccagcagagccgcttcgtcaacgagcggttgcacgccaacatccag
aaggacggcacctattcggtggtcccgcgcatgtggggcggggtgaccacgcccggcgag
ctgcgtgcgatcgccgatgtggtggagaagtacaatgcgccgatggtgaaggtcaccggc
ggccagcggctggatatcttcggcatccgcaaggaggatctgcccgccgtctgggccgat
ctcaatgcggccggcatggtctcgggccatgcctatgccaaggcgctgcgcacggtgaag
acgtgcgtgggttccgaatggtgccgcttcggcacgcaggattccaccggattgggcatc
aagctggagcgaggtttctggggcagctggatgccgcacaagttcaagatggcggtctcc
ggctgtccgcgaaactgcgccgaggcgacgatcaaggacttcggcgtggtgtgcgtggac
tccggctacgagctgcatgtcggcggcaatggcggcattcacgtccgcgcgaccgacctg
ctggtgaaggtcacgaccgaagaggaggcgatgcactacgccgcggccttcgtgcagctc
taccgcgaggaggcgcgctatctggagcgcaccgcgccgtggatcgagcgggtggggctc
gcctatgtgaaggcccgcgtcgtggaacacgaagcggggcgcgacgcgctcgccgcgcgc
ttctggcattcgcaatccttcagccaggacgatccctgggccgagcgcgtcgccggcgcc
gatgccagcctgcaccagccccttcttgccgctgcggagtaa
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