Sphingomonas sp. R1: OIM94_17565
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Entry
OIM94_17565 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_17565
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_17565
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UYY77278
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Position
complement(3686044..3688038)
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AA seq
664 aa
AA seq
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MRTALLAGAAVVAFAPHAFADADPQQANDKNTIIVTAAPYAVSSDEVPTIVTHVDRDQIL
RAGGASISDALAQEPGIAATTFANGASRPIIRGMDATRVRILENGASSSDVSDIGPDHGM
PVDPFSAQSIEVVRGAGTLRYGSQAIGGVVNVINNRVPTKLPTETLAGEAEGSYGTVSNV
GEGGALVDAKLGQFALHADGFYRDAGDYDTPLGTQQNSFFRGHGASVGGSYFFGGNDASH
VGLSVSQYNSKYGIPSDTTYIDMRQTKVMSNDVFAVNAGPLKSINLTASYADYTHDEKEP
DGTIDTTFRNKEFDGHLEFLLNPLGSIRNSAIGFEVQNRKFSAIGQDSSYLFPTTTQSEA
AYLFTEVPLTDILHVQASGRVEHVREEGTPASNLFTSRDFTPVSGAIGALLDVGSHVKLG
FTGSSTGRAPAITELFARGGHDGPNTFETGDPNLKIERANSIEATVRVNLDRFHFDGSAY
STWFNNYIYGDLTGRTCDDDGTCAIGGDGDLKELNYRQQGAHFRGLEGKASYDLFHAKDS
TLQLTALADYTRATLDNGGNVPRIPPYRLGGGVNWLSPIWDAAVQFIHAGKQTKFGAFDT
ETPGYNNLNAQIAWRPFKSQPGIEFAIIGQNLTDEVQRNAASLNKDLVVQPGRNVRFMVK
VATF
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgcccttctcgcgggcgcggctgtcgtcgcgttcgctcctcatgcctttgcc
gatgccgatccgcagcaggcgaacgacaagaacaccatcatcgtcaccgcggccccctat
gccgtgtccagcgacgaagtgccgaccatcgtcacccatgtcgatcgcgaccagatcctg
cgcgccggcggcgccagcatcagcgacgcgctggcgcaggagcccggcatcgccgccacc
accttcgccaacggcgccagccgcccgatcattcgcggcatggacgcgacgcgcgtccgc
atcctcgagaatggcgcgagcagctccgacgtgtcggacatcggccccgaccatggcatg
cccgtcgatcccttctcggcgcagagcatcgaggtcgtccgtggcgccggcacgctgcgc
tatggcagccaggcgatcggtggcgtggtcaacgtgatcaacaaccgcgtgccgacgaag
ctgccgaccgaaacgctcgccggcgaggcagagggcagctacggcaccgtctcgaacgtc
ggcgaaggcggcgcgcttgtcgatgccaagctcggccagttcgccctgcatgccgatggc
ttctaccgggatgccggcgattacgacacgccgctcggcacccagcagaacagcttcttc
cgcgggcacggcgcctcggtcggcggctcctatttcttcggcggcaacgatgcgagccat
gtcggcctgtcggtgagccagtataactcgaaatacggcatcccgagcgacaccacctat
atcgacatgcggcagaccaaggtgatgtcgaacgacgtgtttgcggtgaacgccggtccg
ctcaagtcgatcaacctgaccgccagctatgcggactacacgcatgacgagaaggaaccg
gacggcacgatcgacacgacctttcgcaacaaggaattcgacggccacctcgaattcctg
ctgaacccgctgggttctatccgcaactcggcgatcggcttcgaggtgcagaaccgcaaa
ttctcggcgatcgggcaggacagcagctacctgttcccgaccaccacccagagcgaagcg
gcgtacctgttcaccgaggtgccgctgaccgacatcctgcacgtccaggcgagcggccgc
gtagagcatgtccgcgaggaagggacgcccgcgtcgaacctgttcacatcgcgcgacttc
acgccggtgagcggcgcgatcggcgcgctgctggacgtggggagccatgtgaagctgggc
ttcaccggatccagcaccggccgcgcgccggcgatcaccgagctgttcgcccgcggcggg
catgacggtcccaacaccttcgagacgggcgatccgaacctcaagatcgagcgcgccaat
tcgatcgaggcgaccgtgcgggtgaacctcgatcgcttccacttcgacggcagcgcctat
tcgacctggttcaacaactacatctatggcgacctgacgggccgcacctgcgacgacgac
ggcacctgcgcgatcggcggcgatggcgacctgaaggagctcaactatcgccagcagggc
gcgcatttccgtggtctcgaaggcaaggcgagctacgacctgttccacgcgaaggacagc
acgctgcagctgacggcgctggccgactacacccgcgcgacgctggacaatggcggcaac
gtgccgcgcatcccgccctatcgcctcggcggcggggtcaactggctgagcccgatctgg
gatgccgcggtgcagttcatccatgccggcaagcagaccaagttcggcgccttcgacacc
gagacgccgggctacaacaacctcaacgcccagatcgcctggcggccgttcaagtcgcag
ccggggatcgagttcgcgatcatcggccagaatctgaccgacgaggtgcagcgcaacgcc
gcctcgctgaacaaggatctggtcgtccagccgggccgcaacgtgcggttcatggtcaag
gtcgcgaccttctga
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