Sphingomonas sp. R1: OIM94_18325
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Entry
OIM94_18325 CDS
T11062
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00053
Ascorbate and aldarate metabolism
sprr00520
Amino sugar and nucleotide sugar metabolism
sprr01100
Metabolic pathways
sprr01240
Biosynthesis of cofactors
sprr01250
Biosynthesis of nucleotide sugars
Module
sprr_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
OIM94_18325
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
OIM94_18325
Enzymes [BR:
sprr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
OIM94_18325
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
KR
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UYY77423
LinkDB
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Position
complement(3864765..3865784)
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AA seq
339 aa
AA seq
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MPEPTASSPRVLVTGSAGFIGFHTASRLLQAGATVLGIDNFSDYYDVALKEARNDMLSNH
PNFQVARISIEDQSALAAAWGAFEPDVVIHLAAQAGVRFSIEQPASYIGANVIGTFNLLE
LARHHPVRHFLAASTSSVYGANTDMPFGETQRTATPMSLYAATKGATELMGHSYAHLFRT
PMTFFRFFTVYGPWGRPDMALFKFTRAILAGEPIDVYNNGEMVRDFTFIDDLAESIVRLI
DAVPGEVSVEGDSLSPAAPFRIVNIGAGRPTPLMDYIGAAESALGRTAIKNFLPMQAGDV
PATEASSDLLRRLTGYAPSTTPAEGVAKFVRWYLEHYQS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacccaccgcctcttccccccgcgtgctcgtcaccggatcggccgggttcatc
ggctttcataccgccagccgcctgctccaggcgggcgccacggtgctcggcatcgacaat
ttttcggactattatgacgtcgcgctcaaggaagcgcgcaacgacatgctgtccaaccac
cccaacttccaggtggcgcggatctcgatcgaggaccagagcgcgctcgcggcggcctgg
ggagcgttcgagccggacgtcgtgatccacctcgccgcgcaggccggcgtgcgcttcagc
atcgagcagcccgccagctatatcggcgccaacgtcatcggcacgttcaacctgctcgag
ctggcacgccaccatccggtgcgccacttcctcgcggcgtccaccagctcggtctatggc
gccaataccgacatgccgttcggcgagacccagcgcaccgccacgccgatgagcctttac
gccgccaccaagggcgcgaccgagctcatgggccacagctatgcacacctgttccgcacg
ccgatgaccttcttccgcttcttcacggtctatggcccctggggacggccggacatggcg
ctgttcaagttcacccgcgccattctcgccggcgagccgatcgacgtgtacaacaatggc
gagatggtgcgggacttcaccttcatcgacgatcttgccgaatcgatcgtccgcttgatc
gatgccgtgccgggcgaagtgtccgtcgagggcgacagcctctcccccgccgcgcccttc
cggatcgtcaatatcggtgccggtcgcccgaccccgctgatggactatatcggcgcggcc
gagagcgcgctgggacgcaccgcgatcaagaacttcctgccgatgcaggccggcgacgtg
ccggcgaccgaagcatcgtcggatctgctgcgccgcctcaccggctacgccccctccacc
acgccggcggaaggtgtcgccaagttcgtgcgttggtatctggagcattatcaaagctga
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