Sphingomonas sp. R1: OIM94_18590
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Entry
OIM94_18590 CDS
T11062
Name
(GenBank) xanthine dehydrogenase family protein subunit M
KO
K11178
xanthine dehydrogenase YagS FAD-binding subunit [EC:
1.17.1.4
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00230
Purine metabolism
sprr01100
Metabolic pathways
sprr01120
Microbial metabolism in diverse environments
sprr01232
Nucleotide metabolism
Module
sprr_M00958
Adenine ribonucleotide degradation, AMP => Urate
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
OIM94_18590
Enzymes [BR:
sprr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
OIM94_18590
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GFIT
Motif
Pfam:
FAD_binding_5
CO_deh_flav_C
Motif
Other DBs
NCBI-ProteinID:
UYY79472
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Position
pR1a:43502..44491
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AA seq
329 aa
AA seq
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MTPFRYARAADVPEALRLGAEPGASYLGGGTNLVDLLRETVARPERLVDVSGLPAAIEET
AAGGLRIDAAVRNTALAEHPVVRTRYPMLARAILAGASAQIRNMATVGGNLLQRTRCTYF
YDTDGSRCNKRSPGAGCDAREGFNRIHAVLGASQACVATHPSDMCVALAALDARVHVTGP
SGPRRIAFDDLHRLPGDAPDRDTILASGELIEAIELPPLAYGATSTYRKVRDRASYAFAL
VSVAAALKLDGDRVSDVRIAFGGVAHKPWRATRAEAALRGAVATHQAYLDAAALEFEDAR
PLRDNAFKPILAGRTLAAVLQALARGETA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgttccgctacgcgcgcgccgccgacgtaccagaagcgctgcgcttgggcgcc
gagcccggggccagctatctgggcggcggtaccaatctggtcgatctcctgcgcgagacc
gtggcccgccccgagcggctggtggacgtgagcgggctgcccgcggccatcgaagaaacg
gctgccggggggctgcggatcgacgccgcggtccgcaataccgcgctggccgagcatccg
gtggtgcgcacccgctatccgatgcttgcgcgcgcgattcttgcaggcgcgtcggcgcag
atccggaacatggcgacggtgggtggcaacctgctgcagcggacccgctgcacctatttc
tacgataccgacggatcgcgctgcaacaagcgatcccccggcgcgggctgcgacgcgcgt
gagggattcaaccggatccatgcggtgctgggtgcatcgcaagcctgtgtggccacgcac
ccgtcggacatgtgcgtggccctggccgcgctcgacgcgcgcgtccacgtcacgggcccg
tccggtccgcgccgcatcgcgttcgacgatctgcatcgtcttcccggcgacgccccggac
cgcgatacgatccttgcatcgggcgagctgatcgaggccatcgagctgccgccgctcgcg
tacggcgcgacatcgacctatcggaaggtacgggaccgggcgagctatgcctttgcgctg
gtttcggtggcagcggcgctgaagctcgacggagatcgcgtatcggacgtgcgtatcgcc
tttggcggcgttgcccacaagccctggcgtgcaaccagggcagaggccgcgctgcgcggc
gcggtcgcgacgcatcaggcgtatctggacgctgcagcgctggaattcgaggacgcccgg
ccgctccgcgacaatgcgttcaagccgatattggcggggcggacgctggcggcggtgttg
caggcgctcgcaaggggagagaccgcgtga
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