Sphingomonas sp. R1: OIM94_19065
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Entry
OIM94_19065 CDS
T11062
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_19065
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_19065
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UYY79379
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Position
pR1a:complement(161431..163833)
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AA seq
800 aa
AA seq
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MRRFRTALLIAASTTALLSGHAQAQQAAQPAAPVAADATDGATEIVVTGTRTLGRSRLDS
ASPVDVLSSQALTRQGTTELAAAVAAVAPSIDFPRPSATDGTDAIRPATLRGLSPDQVLV
LVNGVRVNSSALLNVNGSVGRGSAAVDLNTIPTAALERIEVLRDGASAQYGSDAIAGVIN
LRLREARSGGAATATYGIYHTDIDTARGSRSTTGEPVFTASAWQGFGLGSDGFVTITGEY
VNRKPTNRADLDPRTTPANRLTGRFGDPQVEQYTGTINAGKGIGGGFSLYGWASYQDRDT
RSAAFPRLAAVNGVAAPAVVTAGYPDGFLPIINTKSTNAVGAVGVKGDVGAWGVDLHLGY
GRNKIAYRTRNSANYTYGAATPKNFYDGAVIFDQWVAGLDVRRKFDVLQSLNLAFGAEGR
REGYKITPGEQASYEGSGAQGFGGFAPVNAIQRSRRSISGYVDLEAQVTQAFLVDVAVRG
EHYSDFGDTANGKLSARYDVAKWFALRGTVSTGFRAPSLQQQYFTSIAQVVQNGTPVLTG
TFPSTTPVAAALGGKPLQPEKSTNLSLGTVIRAGGFDLSVDAYEIRLRDQLALSENIQSS
FSPQVAAILAPFNVPSARFFINGLRSRTRGIDAVAHYRIGDAANAAGAFDFTLAGNVNEI
VVTRVPTSTATVNPAPVLFARSRVLTIEQGTPGEKVTGTIDWTRGPVGITVRGTYYGDVN
QPGTTPAADIHTGQHLISDLELRYQPRKGAQIAIGASNLFDVYPDRTIVANNSTGVLGFP
SYSPFGFNGRYLYARLGVNW
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagatttcgtacggcgctgctgatcgcggcttccacgactgccctgctctcgggc
catgcccaggcgcagcaggcggcgcagcccgcggcgcccgtcgcggcggacgcgaccgac
ggggcgacggagatcgtcgtcacgggtacccgtaccctgggtcggtcgcggctcgatagc
gcttccccggtcgacgtgctgagcagccaggccttgactcgccaaggcaccaccgaactt
gccgccgccgtggcagccgtcgcgccgtcgatcgatttcccgcggccgtccgcaaccgat
ggcaccgatgccatccgtccggctacgctgcggggcctgtctcccgatcaggtgctggtg
ctggtcaacggcgtgcgcgtgaacagctcggcgctgctcaacgtcaacggctcggtcggg
cgcggttcggcggcggtcgacctcaacaccattcccaccgcggcgctggagcggatcgag
gtgctgcgcgacggcgcctcggcgcaatatggctcggacgcgatcgccggcgtgatcaac
ctgcgcctgcgtgaagcccgctcgggcggcgcggcaaccgcgacctacggcatctatcac
accgacatcgatacggcacgcggcagccgcagcaccacgggcgagccggtcttcaccgcg
tcggcatggcagggcttcggcctgggatcggacggcttcgtcacgatcaccggcgaatat
gtcaatcgcaagccgaccaaccgcgccgacctggatccgcgcaccacgccggcaaaccgc
ctcacgggccgtttcggtgatccgcaggtggagcaatataccggcacgatcaacgccggg
aaagggatcggcggcggtttcagcctctatggctgggccagctatcaggatcgcgacacg
cgcagcgccgccttcccgcgtctggcggcggtgaacggggtagcggccccggcggtggtc
acggcgggctatcccgatggctttctgccgatcatcaacaccaagtcgaccaacgcggtc
ggtgcggtgggcgtgaagggcgatgtcggtgcgtggggcgttgacctccatctcggctat
ggccgcaacaagatcgcctatcgcacgcgcaactcggccaactatacctatggcgccgcg
accccgaagaacttctatgacggcgcggtgatcttcgaccagtgggtcgccggactggac
gtgcgccgcaagttcgatgtcctgcagtcgctcaacctcgccttcggtgccgaggggcgg
cgcgagggctacaagatcacaccgggcgagcaggcctcgtatgaggggtcgggtgcgcag
ggctttggcgggttcgcgccggtcaacgcgatccagcgctcgcggcgcagcatctcgggc
tatgtcgatctcgaagcgcaggtgacccaggcgttcctggtcgacgtcgcggtccgcggc
gaacattattcggactttggcgacaccgccaacggcaagctctcggcacgctatgatgtc
gccaagtggttcgcgctgcgcggcaccgtgtcgaccggcttccgcgcgccgagcctgcag
cagcaatatttcacctcaatcgcccaggtcgtgcaaaacggaacgccggtcctcaccggt
accttcccgtcgaccacgcccgtggcggccgcactgggcggcaagccgctgcagccggaa
aagtccaccaatctctcgctcggcacggtgatccgcgccggcggcttcgacctcagcgtc
gacgcgtacgagatccgtctgcgcgatcagctggcgctttcggagaacatccagtcgagc
ttcagcccgcaggtcgcggcgattctcgcgccgttcaacgtgccgtcggcgcgcttcttc
atcaacggcctgcgctcgcggacccgcggcatcgatgcggtggcgcattaccggatcggc
gatgcagcgaacgcggcgggcgcgttcgacttcaccttggccggcaacgtcaacgagatc
gtcgtcacccgcgtgccgaccagcaccgcgaccgtgaatcccgcaccggtgctgttcgca
cgaagccgcgtgctgacgatcgagcagggtacgcccggcgagaaggtgaccggcacgatc
gattggaccaggggccccgtgggcatcaccgtgcgcggtacctattatggcgacgtcaac
cagcccggcacgacgcccgccgccgacatccataccgggcagcatctgatcagcgacctc
gagctgcgctaccagccccgcaagggcgcccagatcgcgatcggcgccagcaacctgttc
gacgtctatccggatcgaacgatcgtcgccaacaactcgaccggcgtgctgggcttcccg
tcctactcgccgttcggcttcaacggtcgctatctctacgcccgtcttggggtgaactgg
taa
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