Sphingomonas sp. R1: OIM94_19170
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Entry
OIM94_19170 CDS
T11062
Name
(GenBank) response regulator transcription factor
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
sprr Sphingomonas sp. R1
Pathway
sprr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OIM94_19170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sprr02022
]
OIM94_19170
Two-component system [BR:
sprr02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
OIM94_19170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
HTH_24
HTH_68
HTH_29
Sigma70_r4
HTH_38
HTH_IclR
HTH_10
HTH_40
HTH_Tnp_1
HTH_3
HTH_28
HTH_Tnp_ISL3
Xre-like-HTH
HTH_AsnC-type
HTH_7
HTH_11
CENP-B_N
HTH_31
HTH_17
TnsD
MerR
DUF2089
HTH_5
Phage_NinH
Phage_terminase
DUF6115
RepB
Rv2175c_wHTH
HTH_26
cREC_REC
MarR_2
HTH_36
MarR
Motif
Other DBs
NCBI-ProteinID:
UYY79398
LinkDB
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Position
pR1a:complement(187141..187746)
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AA seq
201 aa
AA seq
DB search
MIRIVLAEDQALVLGAIAALLALESDFAIVGRAANGDEALALVREHGPDILLTDIEMPGR
TGLDCAQILAAEKVRTSVVIVTTFARPGYLERARAAGVRGYLLKDTPVDELVAAIRTVAA
GGRVIPADLAAAAWEAGSDPLTDRERDALRLAEEGLSNKDIARRLGLSPGTVRNYLSEAA
GKLGAANRIEAGRTARANGWL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcatcgtcctcgccgaggatcaggcgctggtgctcggcgcaatcgccgcgctg
ctcgcgctggagagcgatttcgcgatcgtcgggcgggccgccaatggcgacgaggcgctg
gcgctggtccgggagcacgggcccgacatcctgctcaccgatatcgaaatgccggggcgt
accgggctcgactgtgcgcagatcctggcagccgaaaaggtgcgcacctctgtggtgatc
gtcaccaccttcgcgcggcccggctatctggagcgcgcccgcgccgccggggtgcggggc
tatctgctcaaggacacaccggtcgacgagctggtcgcagcgatccgcaccgtcgcggcg
ggggggcgggtgatccccgcggacctcgcggccgccgcctgggaggcgggcagcgacccg
ctcaccgatcgcgagcgcgatgcgctgcgactggccgaggagggcctgtcgaacaaggac
atcgcccggcggctcggcctctcgccgggcaccgtgcgcaactatctttccgaagcggca
ggcaagctcggtgcggccaaccggatcgaggccggccgcaccgcccgcgccaatggctgg
ctctag
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integrated database retrieval system
