Sphingomonas sp. R1: OIM94_19480
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Entry
OIM94_19480 CDS
T11062
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
OIM94_19480
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GFIT
Motif
Pfam:
rve
HTH_Tnp_1
HTH_21
rve_2
rve_3
HTH_23
Terminase_5
HTH_28
HTH_Tnp_ISL3
DDE_Tnp_IS240
DUF2408
Motif
Other DBs
NCBI-ProteinID:
UYY79636
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Position
pR1b:join(15349..15589,15589..16490)
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AA seq
380 aa
AA seq
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MGKPNFSDEFKRDAVAQITERGYPVAEVSQRLGVSQHSLYSWKRQLAKVVSGEAGKDAEI
RQLKRELARVTEERDILKKANRVFRSGCKVRYAFIAEHRDRFGVRAMCRCLAVQPSGYYA
WRKSPLSRRAREDARQTELLRRAWNDSGRVYGYRKLHDDLLDHGETCCPNRVARLTRLAG
IKAQIGYKRRPGSHGSKPSLAVDNTLDRQFDVAAPDQAWVTDITYIRTLEGFAYLAVVID
LYSRRVIGWSMQSRQTTDMVLQALHMAVWRRKPRHRVLIHSDQGSQFTSMDWAAFLRAHN
LEHSMSRRGNCHDNAVAESFFASLKRERIRRRTYKTREDARRDVFEYIEMFYNPVRKQVR
NGMLSPVAFERQQLLKAQGV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcccaatttcagcgatgaattcaagcgtgacgcggtggcgcagatcaccgag
cgcggctatccagtagcggaagtctcgcagcgtctcggcgtcagccagcactcgctgtat
tcgtggaagcggcaactggcgaaggtggtgtcaggcgaggccggcaaggatgcggagatc
cgccagctgaagcgcgagctggcccgggtgaccgaggagcgcgacatcctaaaaaaagcc
aaccgcgtatttcgctcgggatgcaaagtgagatacgcgttcattgccgagcatcgcgat
cggtttggcgtgcgggcgatgtgccggtgcctagccgtgcagccaagtggctattatgcg
tggcgaaagagcccgctgagccggcgggctcgggaagatgctcggcagacggagttgctc
cggcgggcctggaacgacagcggcagggtctatggctaccgcaagctgcacgacgacctg
ctcgatcacggcgagacctgctgcccgaaccgggttgccaggctgacccggctggcgggc
atcaaggcgcagatcggctacaagcgcaggcccggcagccatggcagcaagccgtccctg
gcggtcgacaacacgctggaccgccagttcgacgtggctgcgcccgaccaggcctgggta
acagacatcacttacattcgaaccttggaaggcttcgcctatctggcggtcgtgatcgac
ctgtattcccgccgcgtgatcggttggtcgatgcagagccggcagactacagatatggtg
ctgcaggcgctgcacatggcggtatggcgacgcaagccgaggcatcgggtgttgatccac
tcggaccagggctcgcagttcaccagcatggactgggcagccttcctacgcgcgcacaat
cttgagcactcgatgagccgccgcggcaactgccatgacaatgccgtcgccgagagcttc
ttcgcctcgctcaagcgggagcgcatccggcgccgaacgtacaaaacccgcgaggacgcc
cggcgcgacgtgttcgagtacatcgagatgttctacaacccggtgcgcaagcaggtcagg
aacgggatgctgtcgcccgtagcgttcgaacggcagcagcttttgaaggcgcaaggcgtc
tag
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